RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 A0A088AWK7 358 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 C10orf142B7Z368 130 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 PEX11AO75192 247 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 WDR47O94967 919 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 HIST1H2AGP0C0S8 130 aaPredicted RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 THRAP10827 490 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 SRFP11831 508 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 EDN3P14138 238 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 HGFP14210 728 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 ACPPP15309 386 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 LBPP18428 481 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 HIST1H2ADP20671 130 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 CYP2A7P20853 494 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 ITPKAP23677 461 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 MAT2AP31153 395 aaKnown RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 PGM1P36871 562 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 PIK3CGP48736 1102 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 HNMTP50135 292 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 RAP1GDS1P52306 607 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 CUL3Q13618 768 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 GTF2H3Q13889 308 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 ABRAXAS2Q15018 415 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 AGKQ53H12 422 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 TMEM31Q5JXX7 168 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 OGFOD2Q6N063 350 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 KIAA1161Q6NSJ0 714 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 PAOXQ6QHF9 649 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 Q6ZS52 159 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 Q7L0L9 218 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 EFL1Q7Z2Z2 1120 aaKnown RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 HORMAD1Q86X24 394 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 OXR1Q8N573 874 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 FBXO15Q8NCQ5 510 aaPredicted RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 OR9I1Q8NGQ6 314 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 RP9Q8TA86 221 aaKnown RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 METTL6Q8TCB7 284 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 HM13Q8TCT9 377 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 MCOLN3Q8TDD5 553 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 USP7Q93009 1102 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 ATP6V1E2Q96A05 226 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 TUBGCP3Q96CW5 907 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 ZNF514Q96K75 400 aaPredicted RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 HIST1H2AHQ96KK5 128 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 OR4K3Q96R72 315 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 HBEGFQ99075 208 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 CDX2Q99626 313 aaPredicted RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 HIST1H2AJQ99878 128 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 RTKNQ9BST9 563 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 H2AFJQ9BTM1 129 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 THTPAQ9BU02 230 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 SLC17A9Q9BYT1 436 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 TRIM54Q9BYV2 358 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 ZDHHC5Q9C0B5 715 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 ATG10Q9H0Y0 220 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 OR52A5Q9H2C5 316 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 DPEP2Q9H4A9 486 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 DENND2DQ9H6A0 471 aaPredicted RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 WDR26Q9H7D7 661 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 PREBQ9HCU5 417 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 FZD3Q9NPG1 666 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 SLC2A4RGQ9NR83 387 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 FARSBQ9NSD9 589 aaKnown RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 DNAJC11Q9NVH1 559 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.16□□□□□ -1.26
SPG11-204ENST00000557866 C2orf42Q9NWW7 574 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 STOX2Q9P2F5 926 aaPredicted RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 TRPS1Q9UHF7 1281 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 MMP17Q9ULZ9 603 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 SLC22A14Q9Y267 594 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 ANGPTL3Q9Y5C1 460 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 GPR45Q9Y5Y3 372 aa7.16□□□□□ -1.26
SPG11-204ENST00000557866 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.16□□□□□ -1.26
SPG11-204ENST00000557866 TRIOBPQ9H2D6 2365 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3DA0A087WVF3 549 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3IA0A087WXS9 549 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3EA0A087X179 549 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3KA0A087X1G2 549 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TCRBV21S2A2A0A5A6 115 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3FA6NER0 549 aaPredicted RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 PRR19A6NJB7 356 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3LB9A6J9 549 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 PSMD12O00232 456 aaPredicted RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 MANBAO00462 879 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 FBP2O00757 339 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 FFAR3O14843 346 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 AIM2O14862 343 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 EREGO14944 169 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 LSM1O15116 133 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 SLC31A1O15431 190 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 GPR42O15529 346 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 VPS4BO75351 444 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 SORBS2O94875 1100 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 ATP6V1G2O95670 118 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 SLC16A8O95907 504 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 CATP04040 527 aaKnown RBP7.15□□□□□ -1.26
SPG11-204ENST00000557866 CEACAM5P06731 702 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 TBC1D3HP0C7X1 549 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 EBLN1P0CF75 366 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 CHRNB1P11230 501 aa7.15□□□□□ -1.26
SPG11-204ENST00000557866 GABRG2P18507 467 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms