RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 AARS2Q5JTZ9 985 aaKnown RBP15.25■□□□□ 0.03
SCFD1-224ENST00000557713 WASHC2DQ5SRD0 308 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 B3GNTL1Q67FW5 361 aaPredicted RBP15.25■□□□□ 0.03
SCFD1-224ENST00000557713 FRMPD2BQ6IN97 320 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 TTC23LQ6PF05 361 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 PRUNE1Q86TP1 453 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 DTWD1Q8N5C7 304 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 HMGCLL1Q8TB92 370 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 GRHL3Q8TE85 626 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 FAR1Q8WVX9 515 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 RAD51AP1Q96B01 352 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 THOC3Q96J01 351 aaKnown RBP15.25■□□□□ 0.03
SCFD1-224ENST00000557713 MESP1Q9BRJ9 268 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 RAB11FIP5Q9BXF6 653 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 FRMD8P1Q9BZ68 369 aaPredicted RBP15.25■□□□□ 0.03
SCFD1-224ENST00000557713 RAB6BQ9NRW1 208 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 CATSPERZQ9NTU4 200 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 ANAPC5Q9UJX4 755 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 NFS1Q9Y697 457 aa15.25■□□□□ 0.03
SCFD1-224ENST00000557713 HYKKA2RU49 373 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 E7EVH7 732 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 CD3EAPO15446 510 aaKnown RBP15.24■□□□□ 0.03
SCFD1-224ENST00000557713 LRRTM2O43300 516 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 KLHL18O94889 574 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 C1orf105O95561 183 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 IFNB1P01574 187 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 EDN3P14138 238 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 TTPAP49638 278 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 TMED2Q15363 201 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 RBBP7Q16576 425 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 PCID2Q5JVF3 399 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 IRAK1BP1Q5VVH5 260 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 TICAM1Q8IUC6 712 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 TMEM139Q8IV31 216 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 METTL27Q8N6F8 245 aaPredicted RBP15.24■□□□□ 0.03
SCFD1-224ENST00000557713 PPHLN1Q8NEY8 458 aaKnown RBP15.24■□□□□ 0.03
SCFD1-224ENST00000557713 OR2A1Q8NGT9 310 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 VPS50Q96JG6 964 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 LMF1Q96S06 567 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 MIPEPQ99797 713 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 ZNF304Q9HCX3 659 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 TTC7AQ9ULT0 858 aaPredicted RBP15.24■□□□□ 0.03
SCFD1-224ENST00000557713 ZNF148Q9UQR1 794 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 MAU2Q9Y6X3 613 aa15.24■□□□□ 0.03
SCFD1-224ENST00000557713 LOC105369274A0A096LPK9 316 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 LOC102723532A0A0G2JNH3 316 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 A0A1W2PPV9 198 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 KRT87PA6NCN2 255 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 ENO4A6NNW6 628 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 KPNA5O15131 536 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 PSMB5P28074 263 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 CARSP49589 748 aaKnown RBP15.23■□□□□ 0.03
SCFD1-224ENST00000557713 KLC1Q07866 573 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 CDC16Q13042 620 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 TLR1Q15399 786 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 ATG9BQ674R7 924 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 PTRHD1Q6GMV3 140 aaKnown RBP15.23■□□□□ 0.03
SCFD1-224ENST00000557713 RPUSD3Q6P087 351 aaKnown RBP15.23■□□□□ 0.03
SCFD1-224ENST00000557713 FBXO42Q6P3S6 717 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 ISLR2Q6UXK2 745 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 OR4N4Q8N0Y3 316 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 CATSPER1Q8NEC5 780 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 OR2L3Q8NG85 312 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 STT3BQ8TCJ2 826 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 C1orf54Q8WWF1 131 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 CNDP1Q96KN2 507 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 PANX3Q96QZ0 392 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 BAG1Q99933 345 aaPredicted RBP15.23■□□□□ 0.03
SCFD1-224ENST00000557713 CRB3Q9BUF7 120 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 EPS8L2Q9H6S3 715 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 TREX1Q9NSU2 369 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 ZC3H7BQ9UGR2 993 aaKnown RBP15.23■□□□□ 0.03
SCFD1-224ENST00000557713 OSGIN2Q9Y236 505 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 MRFAP1Q9Y605 127 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 CAPN6Q9Y6Q1 641 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 CACNA1DQ01668 2161 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 DOCK10Q96BY6 2186 aa15.23■□□□□ 0.03
SCFD1-224ENST00000557713 IGLV3-12A0A075B6K2 115 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 A0A0J9YVX5 310 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 NRP2O60462 931 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 HPP00738 406 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 APRTP07741 180 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 ZGLP1P0C6A0 271 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 RPS3P23396 243 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCFD1-224ENST00000557713 BDKRB1P46663 353 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 YBX1P67809 324 aaKnown RBP15.22■□□□□ 0.03
SCFD1-224ENST00000557713 MFAP5Q13361 173 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 C1QL3Q5VWW1 255 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 PRMT9Q6P2P2 845 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 LINC00696Q6ZRV3 163 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 RNF44Q7L0R7 432 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 LRRC6Q86X45 466 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 SLC13A5Q86YT5 568 aaPredicted RBP15.22■□□□□ 0.03
SCFD1-224ENST00000557713 SLC34A3Q8N130 599 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 GSDMBQ8TAX9 411 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 SLX1AQ9BQ83 275 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 PAK5Q9P286 719 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 ZNF282Q9UDV7 671 aaPredicted RBP15.22■□□□□ 0.03
SCFD1-224ENST00000557713 GNPTGQ9UJJ9 305 aa15.22■□□□□ 0.03
SCFD1-224ENST00000557713 RUVBL2Q9Y230 463 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms