RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 KYNUQ16719 465 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 SLC5A12Q1EHB4 618 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 NKAIN1Q4KMZ8 207 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 FAM69BQ5VUD6 431 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 YOD1Q5VVQ6 348 aaPredicted RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 DENND5AQ6IQ26 1287 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 C11orf63Q6NUN7 778 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 IGFL2Q6UWQ7 119 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 UNC5AQ6ZN44 842 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 SERPINA9Q86WD7 417 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 TMTC1Q8IUR5 882 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 CNGA4Q8IV77 575 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 CCDC50Q8IVM0 306 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 CDKL3Q8IVW4 592 aaPredicted RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 VSTM4Q8IW00 320 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 DNAJC22Q8N4W6 341 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 PHC3Q8NDX5 983 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 OR13C4Q8NGS5 318 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 OR5K2Q8NHB8 316 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 PPP4R1Q8TF05 950 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 DLG3Q92796 817 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 FKBP10Q96AY3 582 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 VPS50Q96JG6 964 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 OR2A14Q96R47 310 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 TBL1YQ9BQ87 522 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 ILKAPQ9H0C8 392 aaPredicted RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 LUC7LQ9NQ29 371 aaKnown RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 TXLNGQ9NUQ3 528 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 NLE1Q9NVX2 485 aaPredicted RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 IFT80Q9P2H3 777 aaPredicted RBP8.34□□□□□ -1.07
VRK1-206ENST00000557222 FAM8A1Q9UBU6 413 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 PLCL2Q9UPR0 1127 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 ICKQ9UPZ9 632 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 HYOU1Q9Y4L1 999 aa8.34□□□□□ -1.07
VRK1-206ENST00000557222 ANKRD17O75179 2603 aaKnown RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 F5H423 210 aaPredicted RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 PSMD3O43242 534 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 FKBP9O95302 570 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 FTH1P02794 183 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 CHRM5P08912 532 aaPredicted RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 RBP3P10745 1247 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 PVRP15151 417 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 MMP11P24347 488 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 PSMB4P28070 264 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 MC4RP32245 332 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 TSFMP43897 325 aaKnown RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 CACNG1Q06432 222 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 PRKG2Q13237 762 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 ZIC1Q15915 447 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 CYP2A13Q16696 494 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 CCDC181Q5TID7 509 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 B3GNTL1Q67FW5 361 aaPredicted RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 FCRL6Q6DN72 434 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 PACS1Q6VY07 963 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 OTOGQ6ZRI0 2925 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 BEND4Q6ZU67 534 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 PPP1R32Q7Z5V6 425 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 FLVCR1-AS1Q8TAF5 88 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 ACTL9Q8TC94 416 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 STYXQ8WUJ0 223 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 UBE2Q2Q8WVN8 375 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 SLC22A18Q96BI1 424 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 CDKN2AIPNLQ96HQ2 116 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 SPATA13Q96N96 652 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 RANBP9Q96S59 729 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 WDR77Q9BQA1 342 aaPredicted RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 NDC1Q9BTX1 674 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 SPRTNQ9H040 489 aaPredicted RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 SLC26A1Q9H2B4 701 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 KCNF1Q9H3M0 494 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 WDR54Q9H977 334 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 MRM3Q9HC36 420 aaKnown RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 FAM60AQ9NP50 221 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 NPHS2Q9NP85 383 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 IL1RAPL1Q9NZN1 696 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 LUZP4Q9P127 313 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 CCDC88CQ9P219 2028 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 NXT1Q9UKK6 140 aaKnown RBP8.33□□□□□ -1.08
VRK1-206ENST00000557222 ASF1AQ9Y294 204 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 HIF3AQ9Y2N7 669 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 PCDHA3Q9Y5H8 950 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 ZGRF1Q86YA3 2104 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 CSMD1Q96PZ7 3565 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 TACC2O95359 2948 aa8.33□□□□□ -1.08
VRK1-206ENST00000557222 DOCK10Q96BY6 2186 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 PCM1Q15154 2024 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 SLC5A10A0PJK1 596 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 KCNN4O15554 427 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 TJP3O95049 919 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 UMODP07911 640 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 SSTR4P31391 388 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 CETN2P41208 172 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 MAGEA1P43355 309 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 GLRBP48167 497 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 EIF3EP60228 445 aaKnown RBP8.32□□□□□ -1.08
VRK1-206ENST00000557222 OTUD4Q01804 1114 aaKnown RBP8.32□□□□□ -1.08
VRK1-206ENST00000557222 RAPSNQ13702 412 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 LLGL1Q15334 1064 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 PARP6Q2NL67 630 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 DNAJC21Q5F1R6 531 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms