RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ZUFSPQ96AP4 578 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 MS4A14Q96JA4 679 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 IP6K3Q96PC2 410 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 OR2A14Q96R47 310 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 OSBPL9Q96SU4 736 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 LIN7BQ9HAP6 207 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ACSS2Q9NR19 701 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 FAM114A2Q9NRY5 505 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 INTS10Q9NVR2 710 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 UTP6Q9NYH9 597 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 MARCH4Q9P2E8 410 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PLCL2Q9UPR0 1127 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 CRYL1Q9Y2S2 319 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF839A8K0R7 811 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 GOLGA8KD6RF30 607 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 GOLGA8TH3BQL2 631 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 GOLGA8MH3BSY2 632 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 CES2O00748 559 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 RASGRF2O14827 1237 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 SMAD7O15105 426 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ZSCAN9O15535 394 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 IGHEP01854 428 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 TCP1P17987 556 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 OGNP20774 298 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 HSD17B2P37059 387 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 MAGEA6P43360 314 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 CSRP3P50461 194 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PMS2P54278 862 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ARSFP54793 590 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 RRADP55042 308 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 GPS2Q13227 327 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 SEMA3AQ14563 771 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 KCNJ11Q14654 390 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 KYNUQ16719 465 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 TCTE1Q5JU00 501 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ATP1A1-AS1Q5TC04 95 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 MLIPQ5VWP3 458 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF470Q6ECI4 717 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 TCTN3Q6NUS6 607 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF517Q6ZMY9 492 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 CILP2Q8IUL8 1156 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 APLFQ8IW19 511 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PPIL6Q8IXY8 311 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 LILRB2Q8N423 598 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ENDOVQ8N8Q3 282 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 SLC38A9Q8NBW4 561 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 OR2L8Q8NGY9 312 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PROKR1Q8TCW9 393 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ING2Q9H160 280 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 P2RY12Q9H244 342 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 CLMPQ9H6B4 373 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 BRD7Q9NPI1 651 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PCMTD2Q9NV79 361 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 TRMT1Q9NXH9 659 aaKnown RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 SPHK1Q9NYA1 384 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 IFT80Q9P2H3 777 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-222ENST00000556768 NDOR1Q9UHB4 597 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 ASIC3Q9UHC3 531 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 TCFL5Q9UL49 500 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 PLAGL1Q9UM63 463 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 COL6A6A6NMZ7 2263 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 TENM4Q6N022 2769 aa7.06□□□□□ -1.28
SCFD1-222ENST00000556768 TCRBV7S3A2A0A539 114 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 TARM1B6A8C7 271 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 PEX12O00623 359 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 TERTO14746 1132 aaKnown RBP7.05□□□□□ -1.28
SCFD1-222ENST00000556768 ZBTB14O43829 449 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 KLHL41O60662 606 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 SRPX2O60687 465 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-222ENST00000556768 PHF2O75151 1096 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 WISP1O95388 367 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 TTC4O95801 387 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 CATP04040 527 aaKnown RBP7.05□□□□□ -1.28
SCFD1-222ENST00000556768 PKMP14618 531 aaKnown RBP7.05□□□□□ -1.28
SCFD1-222ENST00000556768 ITGAXP20702 1163 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 PKLRP30613 574 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 CCL11P51671 97 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 KLRB1Q12918 225 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 NCF4Q15080 339 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 CYP1B1Q16678 543 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 LONRF1Q17RB8 773 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 TYSND1Q2T9J0 566 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 FAM214AQ32MH5 1076 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 ANKRD20A4Q4UJ75 823 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 PRAMEF17Q5VTA0 474 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 RHBDD2Q6NTF9 364 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 CNSTQ6PJW8 725 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 ASB18Q6ZVZ8 466 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 MED25Q71SY5 747 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 TRIM73Q86UV7 250 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 CAND1Q86VP6 1230 aaKnown RBP7.05□□□□□ -1.28
SCFD1-222ENST00000556768 RAB43Q86YS6 212 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 VRK3Q8IV63 474 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 PALM2Q8IXS6 379 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 SLC35F6Q8N357 371 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 C2orf73Q8N5S3 287 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-222ENST00000556768 ZBTB2Q8N680 514 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 ZNF655Q8N720 491 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-222ENST00000556768 CELF2-AS1Q8N7Q2 184 aa7.05□□□□□ -1.28
SCFD1-222ENST00000556768 TMEM102Q8N9M5 508 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms