RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 KLK3P07288 261 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 CBSLP0DN79 551 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 CHRM3P20309 590 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 ITGAXP20702 1163 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 GABRB3P28472 473 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 CBSP35520 551 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 CCNFP41002 786 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 GRIA3P42263 894 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 VSNL1P62760 191 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 RPS15P62841 145 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 YBX1P67809 324 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 CUL1Q13616 776 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 THOC5Q13769 683 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 FASTKQ14296 549 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 MORF4L2Q15014 288 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 KLHL38Q2WGJ6 581 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 RHBDD2Q6NTF9 364 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 HIBCHQ6NVY1 386 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 NEK10Q6ZWH5 1172 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 APLFQ8IW19 511 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 CNTN4Q8IWV2 1026 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 GPR135Q8IZ08 494 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 C2CD4AQ8NCU7 369 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 BBOF1Q8ND07 529 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 OR2L3Q8NG85 312 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 OR2A1Q8NGT9 310 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 C9orf43Q8TAL5 461 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 ABHD17AQ96GS6 310 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 PWWP2AQ96N64 755 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 MIPEPQ99797 713 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 EBNA1BP2Q99848 306 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 DPH2Q9BQC3 489 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 AARSD1Q9BTE6 412 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 NLNQ9BYT8 704 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 SLC6A20Q9NP91 592 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 IARS2Q9NSE4 1012 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 EURLQ9NYK6 297 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 KLHL42Q9P2K6 505 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 DHCR7Q9UBM7 475 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 MTRF1LQ9UGC7 380 aaKnown RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 TCFL5Q9UL49 500 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 SLC39A10Q9ULF5 831 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 NFU1Q9UMS0 254 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 PLCL2Q9UPR0 1127 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 MAN2B2Q9Y2E5 1009 aa9.92□□□□□ -0.82
SHMT2-224ENST00000556737 UBR5O95071 2799 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-224ENST00000556737 PYCARD-AS1I3L0S3 204 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 J3QKU1 62 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 K7EM74 188 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 DYNC1I1O14576 645 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 NDC80O14777 642 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SUV39H1O43463 412 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SLC28A2O43868 658 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 DNAJB5O75953 348 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 HAUS5O94927 633 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SEC31AO94979 1220 aaKnown RBP9.91□□□□□ -0.82
SHMT2-224ENST00000556737 PDGFAP04085 211 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 HBQ1P09105 142 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 MPC1LP0DKB6 136 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 ERVK-10P10266 1014 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 NR1D1P20393 614 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 RPL21P46778 160 aaKnown RBP9.91□□□□□ -0.82
SHMT2-224ENST00000556737 CARSP49589 748 aaKnown RBP9.91□□□□□ -0.82
SHMT2-224ENST00000556737 PLTPP55058 493 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 CHAF1BQ13112 559 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 BBS9Q3SYG4 887 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SPANXN3Q5MJ09 141 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 C1orf189Q5VU69 101 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 STEAP4Q687X5 459 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 FIGLAQ6QHK4 219 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 CYHR1Q6ZMK1 362 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 RNF44Q7L0R7 432 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 PRICKLE2Q7Z3G6 844 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 PIWIL4Q7Z3Z4 852 aaKnown RBP9.91□□□□□ -0.82
SHMT2-224ENST00000556737 PCGF5Q86SE9 256 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 MCATQ8IVS2 390 aaKnown RBP9.91□□□□□ -0.82
SHMT2-224ENST00000556737 TMEM151BQ8IW70 566 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 CPNE9Q8IYJ1 553 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 ZNF655Q8N720 491 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-224ENST00000556737 FBXO15Q8NCQ5 510 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-224ENST00000556737 OR9A1PQ8NGU1 263 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 PROKR1Q8TCW9 393 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 CALML6Q8TD86 181 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 THAP4Q8WY91 577 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SEC14L1Q92503 715 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 N4BP2L2Q92802 583 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-224ENST00000556737 CERS2Q96G23 380 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 FOPNLQ96NB1 174 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 PKP4Q99569 1192 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 GPR21Q99679 349 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SYNPO2LQ9H987 977 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SLC22A11Q9NSA0 550 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SNX7Q9UNH6 387 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 SRPK3Q9UPE1 567 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 TP53TG5Q9Y2B4 290 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 DHRS7Q9Y394 339 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 COMMD10Q9Y6G5 202 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 AP1M2Q9Y6Q5 423 aa9.91□□□□□ -0.82
SHMT2-224ENST00000556737 IGKV1-8A0A0C4DH67 115 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms