RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
SHMT2-223ENST00000556689 PRR35P0CG20 571 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 MYBL2P10244 700 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 PSMA3P25788 255 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
SHMT2-223ENST00000556689 VSX2P58304 361 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-223ENST00000556689 HSPA14Q0VDF9 509 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 PARP6Q2NL67 630 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 KCTD11Q693B1 232 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 PRMT9Q6P2P2 845 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 NDUFAF7Q7L592 441 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 PRSS58Q8IYP2 241 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 SLC22A15Q8IZD6 547 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 LMNTD1Q8N9Z9 388 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 OR2L8Q8NGY9 312 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 CFAP61Q8NHU2 1237 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 BRIX1Q8TDN6 353 aaKnown RBP12.09□□□□□ -0.47
SHMT2-223ENST00000556689 PSMF1Q92530 271 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 C8orf44Q96CB5 159 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 FAM118BQ9BPY3 351 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 MESP1Q9BRJ9 268 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 MENTQ9BUN1 341 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHMT2-223ENST00000556689 SEC14L3Q9UDX4 400 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 ZC3H7BQ9UGR2 993 aaKnown RBP12.09□□□□□ -0.47
SHMT2-223ENST00000556689 SLC39A10Q9ULF5 831 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 MRPS2Q9Y399 296 aaKnown RBP12.09□□□□□ -0.47
SHMT2-223ENST00000556689 AKAP9Q99996 3911 aa12.09□□□□□ -0.47
SHMT2-223ENST00000556689 CNTRLQ7Z7A1 2325 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 MROH6A6NGR9 719 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 OR51F1A6NGY5 319 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 OR1I1O60431 355 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 ZNF189O75820 626 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-223ENST00000556689 WFS1O76024 890 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 RASAL1O95294 804 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 FKBP9O95302 570 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 BMP10O95393 424 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 SERPINA7P05543 415 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 CCR7P32248 378 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 SOX11P35716 441 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 CA7P43166 264 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 MAGEA1P43355 309 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 EMP2P54851 167 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 RBPJQ06330 500 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 TTC23LQ6PF05 361 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 LAPTM4BQ86VI4 370 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 TAX1BP1Q86VP1 789 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 DCUN1D3Q8IWE4 304 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 DTWD1Q8N5C7 304 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 SUN3Q8TAQ9 357 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 ASZ1Q8WWH4 475 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 IL17FQ96PD4 163 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 OSBPL8Q9BZF1 889 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 LRRC40Q9H9A6 602 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 ABI3Q9P2A4 366 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 CIDEBQ9UHD4 219 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 DOCK10Q96BY6 2186 aa12.08□□□□□ -0.48
SHMT2-223ENST00000556689 CCDC162PA2VCL2 907 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 RASGRF2O14827 1237 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 PSMD3O43242 534 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 PRICKLE3O43900 615 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-223ENST00000556689 CTSVO60911 334 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 MFAP3LO75121 409 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 GPC4O75487 556 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 F10P00742 488 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 EIF2S1P05198 315 aaKnown RBP12.07□□□□□ -0.48
SHMT2-223ENST00000556689 UQCRHP07919 91 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 COX6A1P12074 109 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 CXCR2P25025 360 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 MST1P26927 711 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 FOXN2P32314 431 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 CASP6P55212 293 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 GRB7Q14451 532 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 UNC5DQ6UXZ4 953 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 ARHGEF18Q6ZSZ5 1173 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 VRK3Q8IV63 474 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 CNGA4Q8IV77 575 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 VSTM4Q8IW00 320 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 SIRT6Q8N6T7 355 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 TSSK1BQ9BXA7 367 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 TRIM8Q9BZR9 551 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 PIH1D1Q9NWS0 290 aaKnown RBP12.07□□□□□ -0.48
SHMT2-223ENST00000556689 SH3BGRL2Q9UJC5 107 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 PCDHA3Q9Y5H8 950 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 FAM169AQ9Y6X4 670 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 MYO7BQ6PIF6 2116 aa12.07□□□□□ -0.48
SHMT2-223ENST00000556689 PCM1Q15154 2024 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 SVILO95425 2214 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 POLQO75417 2590 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 IGLV3-12A0A075B6K2 115 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 A0A0J9YVX5 310 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 PJA2O43164 708 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 TJP3O95049 919 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 MED26O95402 600 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 METTL18O95568 372 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 WDPCPO95876 746 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 APOA4P06727 396 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 ICAM2P13598 275 aa12.06□□□□□ -0.48
SHMT2-223ENST00000556689 FBLP22087 321 aaKnown RBP12.06□□□□□ -0.48
SHMT2-223ENST00000556689 SSTR2P30874 369 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms