RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 MLIPQ5VWP3 458 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 CASC4Q6P4E1 433 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 TLDC1Q6P9B6 456 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 LRRC8BQ6P9F7 803 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 MED25Q71SY5 747 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 LDB1Q86U70 411 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 ATCAYQ86WG3 371 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 KRT222Q8N1A0 295 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 Q8N3U1 123 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 TMEM102Q8N9M5 508 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 RAD51AP1Q96B01 352 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 NAP1L3Q99457 506 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 NRTNQ99748 197 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 CHRNA10Q9GZZ6 450 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 MRM3Q9HC36 420 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 FAM60AQ9NP50 221 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 SPHK1Q9NYA1 384 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 TTC7AQ9ULT0 858 aaPredicted RBP7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 PCDHGB7Q9Y5F8 929 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 PCDHGA9Q9Y5G4 932 aaKnown RBP7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 ATMQ13315 3056 aa7.41□□□□□ -1.22
HNRNPC-226ENST00000556628 ZNF462Q96JM2 2506 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 UQCRHLA0A096LP55 91 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 MAGEB16A2A368 324 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 CTAGE9A4FU28 777 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 E5RI56 91 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 PEX12O00623 359 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 RASGRF2O14827 1237 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 KLHL41O60662 606 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 DPM1O60762 260 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 DNAJB5O75953 348 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 SLCO2B1O94956 709 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 FKBP9O95302 570 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 KRT14P02533 472 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 UQCRHP07919 91 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 MAGP20916 626 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 RPS3P23396 243 aaKnown RBP eCLIP7.4□□□□□ -1.223e-12■□□□□ 11
HNRNPC-226ENST00000556628 OTX2P32243 289 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 CCNFP41002 786 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 VPS41P49754 854 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 GPS1Q13098 491 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 IL10RAQ13651 578 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 SSPNQ14714 243 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 NAA25Q14CX7 972 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 TRIP13Q15645 432 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 ZIC1Q15915 447 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 ZNF789Q5FWF6 425 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 C1orf189Q5VU69 101 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 ARMC3Q5W041 872 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 CPZQ66K79 652 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 LCN10Q6JVE6 187 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 RHBDD2Q6NTF9 364 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 FAM198BQ6UWH4 519 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 CES3Q6UWW8 571 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 HPS6Q86YV9 775 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 VRK3Q8IV63 474 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 C2orf73Q8N5S3 287 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 ZNF655Q8N720 491 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 TTC29Q8NA56 475 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 CLEC1AQ8NC01 280 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 OR2L8Q8NGY9 312 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 PROKR1Q8TCW9 393 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 LKAAEAR1Q8TD35 194 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 MAGOHBQ96A72 148 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 MFSD3Q96ES6 412 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 PBKQ96KB5 322 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 FER1L6-AS2Q96M78 137 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 TCF12Q99081 682 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 KIFC1Q9BW19 673 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 TRIM55Q9BYV6 548 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 SPRTNQ9H040 489 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 P2RY12Q9H244 342 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 CCDC68Q9H2F9 335 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 L2HGDHQ9H9P8 463 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 TREX1Q9NSU2 369 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 SYBUQ9NX95 663 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 MARCH4Q9P2E8 410 aaPredicted RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 DHCR7Q9UBM7 475 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 CIDEBQ9UHD4 219 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 SOX13Q9UN79 622 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 CDYLQ9Y232 598 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 PTRH2Q9Y3E5 179 aaKnown RBP7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 JRKLQ9Y4A0 524 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 ZNF451Q9Y4E5 1061 aa7.4□□□□□ -1.22
HNRNPC-226ENST00000556628 PIEZO2Q9H5I5 2752 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 TNRC6AQ8NDV7 1962 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 GOLGA6L10A0A0M3HER8 536 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 ZNF839A8K0R7 811 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 GOLGA8KD6RF30 607 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 GOLGA8TH3BQL2 631 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 K7EM74 188 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 DYNC1I1O14576 645 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 ZNF185O15231 689 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 URI1O94763 535 aaPredicted RBP7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 SLU7O95391 586 aaKnown RBP7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 C1orf105O95561 183 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 ESR1P03372 595 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 CAPN1P07384 714 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 TPBGLP0DKB5 382 aa7.39□□□□□ -1.23
HNRNPC-226ENST00000556628 CBSLP0DN79 551 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms