RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TMEM121Q9BTD3 319 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 SNRNP25Q9BV90 132 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 NDST4Q9H3R1 872 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 KIR3DX1Q9H7L2 352 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 GRPEL1Q9HAV7 217 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 PCDH9Q9HC56 1237 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 IMP3Q9NV31 184 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 ETNK2Q9NVF9 386 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 SLC24A2Q9UI40 661 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 RWDD2AQ9UIY3 292 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 TINAGQ9UJW2 476 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 POMT2Q9UKY4 750 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 PSMD13Q9UNM6 376 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 CDYLQ9Y232 598 aa6.59□□□□□ -1.35
ATXN3-236ENST00000556220 CFAP20Q9Y6A4 193 aaKnown RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 NCOA6Q14686 2063 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-236ENST00000556220 CCDC88CQ9P219 2028 aa6.59□□□□□ -1.36
ATXN3-236ENST00000556220 INTS1Q8N201 2190 aaKnown RBP6.58□□□□□ -1.36
ATXN3-236ENST00000556220 NSD1Q96L73 2696 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-236ENST00000556220 DYTNA2CJ06 578 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 GOLGA6L4A6NEF3 574 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 H3BMH7 237 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 MATN2O00339 956 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 PRPSAP2O60256 369 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 RASAL1O95294 804 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 ENDOUP21128 410 aaKnown RBP6.58□□□□□ -1.36
ATXN3-236ENST00000556220 PSMA2P25787 234 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 TNFSF10P50591 281 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 SRSF3P84103 164 aaKnown RBP6.58□□□□□ -1.36
ATXN3-236ENST00000556220 DSC2Q02487 901 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 XRCC4Q13426 336 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 GTF2H3Q13889 308 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 SLC9A5Q14940 896 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 VWA3BQ502W6 1294 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 METRNLQ641Q3 311 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 TMCO3Q6UWJ1 677 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 CDHR3Q6ZTQ4 885 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 MON1BQ7L1V2 547 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 POLNQ7Z5Q5 900 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 PRIMA1Q86XR5 153 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 LRRC49Q8IUZ0 686 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATXN3-236ENST00000556220 ARRDC2Q8TBH0 407 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 BRSK1Q8TDC3 778 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 CPLX3Q8WVH0 158 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 NINJ1Q92982 152 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 KRTAP4-11Q9BYQ6 195 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 PITPNM3Q9BZ71 974 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 SPRTNQ9H040 489 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-236ENST00000556220 ZWILCHQ9H900 591 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 SLC22A11Q9NSA0 550 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 CCM2LQ9NUG4 571 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-236ENST00000556220 SIRT5Q9NXA8 310 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 PLA2G3Q9NZ20 509 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 NFKBIL1Q9UBC1 381 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-236ENST00000556220 CDC23Q9UJX2 597 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 TMPRSS11EQ9UL52 423 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 ZNF835Q9Y2P0 537 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 MEMO1Q9Y316 297 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 COLEC10Q9Y6Z7 277 aa6.58□□□□□ -1.36
ATXN3-236ENST00000556220 GSAPA4D1B5 854 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 CLEC3AO75596 197 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 OR2B3O76000 313 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 WISP2O76076 250 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 PRAMEF1O95521 474 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 ATP1A3P13637 1013 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 IGFBP2P18065 325 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 HLA-DPA1P20036 260 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 MIPP30301 263 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 SOX5P35711 763 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 FOLH1Q04609 750 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 NIPAL4Q0D2K0 466 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 MAMLD1Q13495 774 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 NFE2L1Q14494 772 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 BBS9Q3SYG4 887 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 ZFYVE27Q5T4F4 411 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 TMEM220Q6QAJ8 160 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 Q6ZPB1 254 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-236ENST00000556220 CYP4V2Q6ZWL3 525 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-236ENST00000556220 NLRC3Q7RTR2 1065 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 BIVMQ86UB2 503 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 MAML1Q92585 1016 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 NRGNQ92686 78 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 N4BP2L2Q92802 583 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-236ENST00000556220 VPS50Q96JG6 964 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 SIGLEC10Q96LC7 697 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 C20orf173Q96LM9 149 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 C12orf66Q96MD2 445 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 TTC25Q96NG3 672 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 VPS35Q96QK1 796 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 XPO4Q9C0E2 1151 aaKnown RBP6.57□□□□□ -1.36
ATXN3-236ENST00000556220 KLHL25Q9H0H3 589 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 TSPY26PQ9H489 355 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 ZCCHC4Q9H5U6 513 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 TXLNGQ9NUQ3 528 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 RBM22Q9NW64 420 aaKnown RBP eCLIP6.57□□□□□ -1.36
ATXN3-236ENST00000556220 DHCR7Q9UBM7 475 aaKnown RBP6.57□□□□□ -1.36
ATXN3-236ENST00000556220 AMACRQ9UHK6 382 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 ACSL5Q9ULC5 683 aa6.57□□□□□ -1.36
ATXN3-236ENST00000556220 SHOC2Q9UQ13 582 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms