RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CHRAC1Q9NRG0 131 aa3.81□□□□□ -1.8
LINC00648-202ENST00000555985 EVA1BQ9NVM1 165 aa3.81□□□□□ -1.8
LINC00648-202ENST00000555985 PIH1D1Q9NWS0 290 aaKnown RBP3.81□□□□□ -1.8
LINC00648-202ENST00000555985 SYBUQ9NX95 663 aa3.81□□□□□ -1.8
LINC00648-202ENST00000555985 CPNE7Q9UBL6 633 aa3.81□□□□□ -1.8
LINC00648-202ENST00000555985 EPHA6Q9UF33 1036 aa3.81□□□□□ -1.8
LINC00648-202ENST00000555985 GPSM3Q9Y4H4 160 aa3.81□□□□□ -1.8
LINC00648-202ENST00000555985 PCDHGA7Q9Y5G6 932 aa3.81□□□□□ -1.8
LINC00648-202ENST00000555985 GPC6Q9Y625 555 aaPredicted RBP3.81□□□□□ -1.8
LINC00648-202ENST00000555985 SLC30A1Q9Y6M5 507 aa3.81□□□□□ -1.8
LINC00648-202ENST00000555985 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.81□□□□□ -1.8
LINC00648-202ENST00000555985 RP1P56715 2156 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 PCSK5Q92824 1860 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 SMG1Q96Q15 3661 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 PIKFYVEQ9Y2I7 2098 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 PRAMEF33A0A0G2JMD5 474 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 FUOMA2VDF0 154 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 TRABD2BA6NFA1 517 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 OR51F1A6NGY5 319 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 B4DGG1 531 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 H3BMH7 237 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 DNALI1O14645 258 aaPredicted RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 TOX3O15405 576 aaPredicted RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 BRINP1O60477 761 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 CDH16O75309 829 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 FKBP6O75344 327 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 AVILO75366 819 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 POP7O75817 140 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 SLCO2B1O94956 709 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 TTC4O95801 387 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 RPLP0P05388 317 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 MSL3P1P0C860 447 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ACP5P13686 325 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 EIF2S3P41091 472 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ACTR1BP42025 376 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 LIMK2P53671 638 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 SLC18A1P54219 525 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ERVPABLB-1P60509 514 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ACTR3P61158 418 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ACTR1AP61163 376 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 DLG1Q12959 904 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 TRA2AQ13595 282 aaKnown RBP eCLIP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 BOP1Q14137 746 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 GRB7Q14451 532 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 NFE2L1Q14494 772 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 TRMT5Q32P41 509 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 MSS51Q4VC12 460 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 CTSL3PQ5NE16 218 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 LYPLAL1Q5VWZ2 237 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 KIAA0930Q6ICG6 404 aaPredicted RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 DHRS4L2Q6PKH6 230 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 AFTPHQ6ULP2 937 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 CHST15Q7LFX5 561 aaPredicted RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 RD3Q7Z3Z2 195 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 DTX1Q86Y01 620 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ERI1Q8IV48 349 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 PEX5LQ8IYB4 626 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 LILRA3Q8N6C8 439 aaPredicted RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 BEND7Q8N7W2 519 aaPredicted RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 AVL9Q8NBF6 648 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 HM13Q8TCT9 377 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 LKAAEAR1Q8TD35 194 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 KLHL6Q8WZ60 621 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 LPGAT1Q92604 370 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 TMEM159Q96B96 161 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ATXN7L3BQ96GX2 97 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 NEURL2Q9BR09 285 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 HGH1Q9BTY7 390 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 DRC3Q9H069 523 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ASB8Q9H765 288 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 POT1Q9NUX5 634 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 SELENONQ9NZV5 590 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 TMEM9Q9P0T7 183 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 SIRPGQ9P1W8 387 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 KCNK6Q9Y257 313 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 KLK4Q9Y5K2 254 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 NCOR2Q9Y618 2525 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ASXL3Q9C0F0 2248 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 NUP210LQ5VU65 1888 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 GON4LQ3T8J9 2241 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 C15orf38-AP3S2A0A0A6YYH1 394 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 GOLGA8TH3BQL2 631 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 TERTO14746 1132 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 PRPF4O43172 522 aaKnown RBP eCLIP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 OR1I1O60431 355 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 USP1O94782 785 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 CDK14O94921 469 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 WISP3O95389 354 aaPredicted RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 APRTP07741 180 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ERGP11308 486 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 ESRRAP11474 423 aaPredicted RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 MTHFD1P11586 935 aaKnown RBP3.8□□□□□ -1.8
LINC00648-202ENST00000555985 SLC2A4P14672 509 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 CD9P21926 228 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 MGAT1P26572 445 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 AOAHP28039 575 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 NSG1P42857 185 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 CSRP3P50461 194 aa3.8□□□□□ -1.8
LINC00648-202ENST00000555985 BCAP31P51572 246 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms