RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TMEM154Q6P9G4 183 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 G2E3Q7L622 706 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 FAM131BQ86XD5 332 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 NPRL2Q8WTW4 380 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 TBATAQ96M53 351 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 C7orf26Q96N11 449 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 NEK1Q96PY6 1258 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 LGMNQ99538 433 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 PARLQ9H300 379 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 HRH4Q9H3N8 390 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 Q9N2K0 584 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 TSPAN16Q9UKR8 245 aa2.22□□□□□ -2.05
SRP54-207ENST00000555535 A0A087WWV3 80 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 IGKV6-21A0A0C4DH24 114 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 ANKUB1A6NFN9 424 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 TMEM221A6NGB7 291 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 TFECO14948 347 aaPredicted RBP2.21□□□□□ -2.06
SRP54-207ENST00000555535 CEACAM4O75871 244 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 KRT6AP02538 564 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 KRT6BP04259 564 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 SMIM18P0DKX4 95 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 KLK2P20151 261 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 SOX3P41225 446 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 KRT6CP48668 564 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 FCHO2Q0JRZ9 810 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 CDH18Q13634 790 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 NR1D2Q14995 579 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 C3AR1Q16581 482 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 CA9Q16790 459 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 TEX38Q6PEX7 206 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 BAIAP2L2Q6UXY1 529 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 LEKR1Q6ZMV7 388 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 HAUS6Q7Z4H7 955 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 NUDT13Q86X67 352 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 CCDC107Q8WV48 283 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 USP6NLQ92738 828 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 DHX58Q96C10 678 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 ZNF597Q96LX8 424 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 FAM20AQ96MK3 541 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 OLFM1Q99784 485 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 MIS12Q9H081 205 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 SPATC1LQ9H0A9 340 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 TBC1D17Q9HA65 648 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 C9orf78Q9NZ63 289 aaPredicted RBP2.21□□□□□ -2.06
SRP54-207ENST00000555535 GRIP1Q9Y3R0 1128 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 TRIM17Q9Y577 477 aa2.21□□□□□ -2.06
SRP54-207ENST00000555535 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 IGHV4-30-2A0A087WSY4 118 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 NPIPB9F8W1W9 429 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 H0Y9J4 135 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 FPGTO14772 594 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 TBX18O95935 607 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 HPP00738 406 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 OR2T7P0C7T2 308 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 TM4SF1P30408 202 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 CSTF2P33240 577 aaKnown RBP eCLIP2.2□□□□□ -2.06
SRP54-207ENST00000555535 GARSP41250 739 aaKnown RBP2.2□□□□□ -2.06
SRP54-207ENST00000555535 MAT1AQ00266 395 aaKnown RBP2.2□□□□□ -2.06
SRP54-207ENST00000555535 G3BP1Q13283 466 aaKnown RBP eCLIP2.2□□□□□ -2.06
SRP54-207ENST00000555535 IRF3Q14653 427 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 CRYMQ14894 314 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 FAM189A2Q15884 450 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 PRR30Q53SZ7 412 aaPredicted RBP2.2□□□□□ -2.06
SRP54-207ENST00000555535 SLC35D3Q5M8T2 416 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 NOTUMQ6P988 496 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 TMCO3Q6UWJ1 677 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 TMPRSS11BQ86T26 416 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 PHC2Q8IXK0 858 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 FBXO39Q8N4B4 442 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 SCFD2Q8WU76 684 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 CCDC3Q9BQI4 270 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 HOXD1Q9GZZ0 328 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 TNFRSF19Q9NS68 423 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 ORC3Q9UBD5 711 aaPredicted RBP2.2□□□□□ -2.06
SRP54-207ENST00000555535 ZNF148Q9UQR1 794 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 VSIG4Q9Y279 399 aa2.2□□□□□ -2.06
SRP54-207ENST00000555535 TDRD9Q8NDG6 1382 aaKnown RBP2.2□□□□□ -2.06
SRP54-207ENST00000555535 LRRC72A6NJI9 287 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 PAPSS1O43252 624 aaPredicted RBP2.19□□□□□ -2.06
SRP54-207ENST00000555535 ZNF354AO60765 605 aaPredicted RBP2.19□□□□□ -2.06
SRP54-207ENST00000555535 PRAMEF11O60813 436 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 RPL35AP18077 110 aaKnown RBP2.19□□□□□ -2.06
SRP54-207ENST00000555535 TNFAIP3P21580 790 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 SIRPAP78324 504 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 IRX4P78413 519 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 ZRSR2Q15696 482 aaKnown RBP2.19□□□□□ -2.06
SRP54-207ENST00000555535 TAB1Q15750 504 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 UGT3A2Q3SY77 523 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 SYT14P1Q58G82 188 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 SPECC1Q5M775 1068 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 CDHR3Q6ZTQ4 885 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 CEP57Q86XR8 500 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 KLHDC1Q8N7A1 406 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 PIGBQ92521 554 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 C2orf48Q96LS8 159 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 SDHCQ99643 169 aaPredicted RBP2.19□□□□□ -2.06
SRP54-207ENST00000555535 CHCHD5Q9BSY4 110 aa2.19□□□□□ -2.06
SRP54-207ENST00000555535 FTOQ9C0B1 505 aaKnown RBP eCLIP2.19□□□□□ -2.06
SRP54-207ENST00000555535 FAM49AQ9H0Q0 323 aaPredicted RBP2.19□□□□□ -2.06
SRP54-207ENST00000555535 WNT5BQ9H1J7 359 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms