RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TLCD1Q96CP7 247 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 APOPT1Q96IL0 206 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 SCYL1Q96KG9 808 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 MAP3K3Q99759 626 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 MIPEPQ99797 713 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 EGFL8Q99944 293 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 ATG10Q9H0Y0 220 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 STMN4Q9H169 189 aaPredicted RBP12.24□□□□□ -0.45
SYNE2-219ENST00000555323 SEMA6CQ9H3T2 930 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 ZNF446Q9NWS9 450 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 CD274Q9NZQ7 290 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 CLCA2Q9UQC9 943 aa12.24□□□□□ -0.45
SYNE2-219ENST00000555323 GSAPA4D1B5 854 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 NCF1BA6NI72 391 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 NCF1CA8MVU1 366 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 STX16-NPEPL1H3BU86 382 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 TK2O00142 265 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 STX16O14662 325 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 ATP8B1O43520 1251 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 PLIN3O60664 434 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 PROCP04070 461 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 NCF1P14598 390 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 LSSP48449 732 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 INHBCP55103 352 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 TBPL1P62380 186 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 ABATP80404 500 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 NFKB2Q00653 900 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 RELAQ04206 551 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 PCDH1Q08174 1060 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 SETDB1Q15047 1291 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 PCBP2Q15366 365 aaKnown RBP eCLIP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 SF1Q15637 639 aaKnown RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 C16orf46Q6P387 395 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 GALNT15Q8N3T1 639 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 OR2L3Q8NG85 312 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 UBTD2Q8WUN7 234 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 TGM7Q96PF1 710 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 DEPDC7Q96QD5 511 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 OR4K3Q96R72 315 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 TMEM79Q9BSE2 394 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 HAUS8Q9BT25 410 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 C1QTNF3Q9BXJ4 246 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 CD244Q9BZW8 370 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 CENPHQ9H3R5 247 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 ZNF768Q9H5H4 540 aaKnown RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 CNOT10Q9H9A5 744 aaKnown RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 CCDC177Q9NQR7 707 aaPredicted RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 CPSF2Q9P2I0 782 aaKnown RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 TNPO3Q9Y5L0 923 aaKnown RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 CNOT1A5YKK6 2376 aaKnown RBP12.23□□□□□ -0.45
SYNE2-219ENST00000555323 DCHS1Q96JQ0 3298 aa12.23□□□□□ -0.45
SYNE2-219ENST00000555323 IGHV5-51A0A0C4DH38 117 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 A0A0J9YY10 115 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 SUPT3HB4E1H0 165 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 G3V2L1 256 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 HGSO14964 777 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-219ENST00000555323 KIF1CO43896 1103 aaKnown RBP12.22□□□□□ -0.45
SYNE2-219ENST00000555323 SUPT3HO75486 399 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 STK16O75716 305 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 S100BP04271 92 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-219ENST00000555323 MSL3P1P0C860 447 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 JUPP14923 745 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 HRH2P25021 359 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 MPSTP25325 297 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 RPA3P35244 121 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-219ENST00000555323 SLC18A1P54219 525 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 NAA25Q14CX7 972 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 PFKFB4Q16877 469 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 C18orf21Q32NC0 220 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-219ENST00000555323 CACHD1Q5VU97 1274 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 KIAA1614Q5VZ46 1190 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 ICE2Q659A1 982 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 FAM92BQ6ZTR7 304 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 B3GNT8Q7Z7M8 397 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 THOC6Q86W42 341 aaKnown RBP12.22□□□□□ -0.45
SYNE2-219ENST00000555323 FBXO39Q8N4B4 442 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 RDH11Q8TC12 318 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 TCP10LQ8TDR4 215 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 ARL8AQ96BM9 186 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 PYCR2Q96C36 320 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 LIN37Q96GY3 246 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-219ENST00000555323 SLC41A2Q96JW4 573 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 CCDC74BQ96LY2 380 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 PPM1MQ96MI6 270 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 TRAPPC9Q96Q05 1148 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 CAPS2Q9BXY5 557 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 SYNDIG1Q9H7V2 258 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 TAC3Q9UHF0 121 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 WASF3Q9UPY6 502 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 SLC22A14Q9Y267 594 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 BTRCQ9Y297 605 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 KCNE2Q9Y6J6 123 aa12.22□□□□□ -0.45
SYNE2-219ENST00000555323 COL27A1Q8IZC6 1860 aaPredicted RBP12.22□□□□□ -0.45
SYNE2-219ENST00000555323 KNTC1P50748 2209 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 IGKV1-8A0A0C4DH67 115 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 SLC9B1P1A6NJY1 282 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 DYNC1I1O14576 645 aa12.21□□□□□ -0.45
SYNE2-219ENST00000555323 PRPF4O43172 522 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYNE2-219ENST00000555323 DLX3O60479 287 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms