RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 GPR42O15529 346 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 UNC5CO95185 931 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 UQCRHP07919 91 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 CELA2AP08217 269 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 PSMB5P28074 263 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 CTNNA1P35221 906 aaKnown RBP12.52□□□□□ -0.41
XRCC3-212ENST00000555231 CARSP49589 748 aaKnown RBP12.52□□□□□ -0.41
XRCC3-212ENST00000555231 TNFSF10P50591 281 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 PLOD1Q02809 727 aaPredicted RBP12.52□□□□□ -0.41
XRCC3-212ENST00000555231 OCA2Q04671 838 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 EEF1A2Q05639 463 aaKnown RBP12.52□□□□□ -0.41
XRCC3-212ENST00000555231 PARP6Q2NL67 630 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 FAM214AQ32MH5 1076 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 DNAJC21Q5F1R6 531 aaKnown RBP12.52□□□□□ -0.41
XRCC3-212ENST00000555231 NLRP9Q7RTR0 991 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 GDF7Q7Z4P5 450 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 LAPTM4BQ86VI4 370 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 DCUN1D3Q8IWE4 304 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 KBTBD2Q8IY47 623 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 KRT222Q8N1A0 295 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 FAM71DQ8N9W8 422 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 SLC22A18Q96BI1 424 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 LURAP1Q96LR2 239 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 ZNF285Q96NJ3 590 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 LRRC40Q9H9A6 602 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 SUCOQ9UBS9 1254 aaKnown RBP12.52□□□□□ -0.41
XRCC3-212ENST00000555231 SLC2A6Q9UGQ3 507 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 ZC3H7BQ9UGR2 993 aaKnown RBP12.52□□□□□ -0.41
XRCC3-212ENST00000555231 SLC39A10Q9ULF5 831 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 PCDHA3Q9Y5H8 950 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 PCNX1Q96RV3 2341 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 CSMD2Q7Z408 3487 aa12.52□□□□□ -0.41
XRCC3-212ENST00000555231 LOC105369274A0A096LPK9 316 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 NSG1A0A0A6YYJ2 146 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 TRAV17A0A0B4J275 112 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 LOC102723532A0A0G2JNH3 316 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 FITM1A5D6W6 292 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 MROH6A6NGR9 719 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 RASGRF2O14827 1237 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 PRICKLE3O43900 615 aaPredicted RBP12.51□□□□□ -0.41
XRCC3-212ENST00000555231 GPC4O75487 556 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 USP1O94782 785 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 GOT2P00505 430 aaKnown RBP12.51□□□□□ -0.41
XRCC3-212ENST00000555231 EIF2S1P05198 315 aaKnown RBP12.51□□□□□ -0.41
XRCC3-212ENST00000555231 PRR35P0CG20 571 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 COX6A1P12074 109 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 PSMA3P25788 255 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 MST1P26927 711 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 HTR1EP28566 365 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 SOX11P35716 441 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 SEMA3AQ14563 771 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 CCSMST1Q4G0I0 132 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 ATG9BQ674R7 924 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 FAAH2Q6GMR7 532 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 OR4N4Q8N0Y3 316 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 OR52K1Q8NGK4 314 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 HDAC10Q969S8 669 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 MIPEPQ99797 713 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 YIPF2Q9BWQ6 316 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.51□□□□□ -0.418e-6■■■■□ 20.1
XRCC3-212ENST00000555231 IL1RAPL1Q9NZN1 696 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 ZNF282Q9UDV7 671 aaPredicted RBP12.51□□□□□ -0.41
XRCC3-212ENST00000555231 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 PCDHA13Q9Y5I0 950 aa12.51□□□□□ -0.41
XRCC3-212ENST00000555231 KLF2Q9Y5W3 355 aaPredicted RBP12.51□□□□□ -0.41
XRCC3-212ENST00000555231 AKR1B15C9JRZ8 316 aaPredicted RBP12.5□□□□□ -0.41
XRCC3-212ENST00000555231 RPN2P04844 631 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 FBLP22087 321 aaKnown RBP12.5□□□□□ -0.41
XRCC3-212ENST00000555231 PTPN7P35236 360 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 BDKRB1P46663 353 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 EMP2P54851 167 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 GDF10P55107 478 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 YBX1P67809 324 aaKnown RBP12.5□□□□□ -0.41
XRCC3-212ENST00000555231 ZNF630Q2M218 657 aaPredicted RBP12.5□□□□□ -0.41
XRCC3-212ENST00000555231 CNSTQ6PJW8 725 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 TMEM207Q6UWW9 146 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 UNC5DQ6UXZ4 953 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 BNC2Q6ZN30 1099 aaPredicted RBP12.5□□□□□ -0.41
XRCC3-212ENST00000555231 ZNF534Q76KX8 674 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 NDUFAF7Q7L592 441 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 LDB1Q86U70 411 aaPredicted RBP12.5□□□□□ -0.41
XRCC3-212ENST00000555231 CNGA4Q8IV77 575 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 ZNF808Q8N4W9 903 aaPredicted RBP12.5□□□□□ -0.41
XRCC3-212ENST00000555231 OR13J1Q8NGT2 312 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 ASZ1Q8WWH4 475 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 HAS2Q92819 552 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 ZUFSPQ96AP4 578 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 SEC14L3Q9UDX4 400 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 FAM169AQ9Y6X4 670 aa12.5□□□□□ -0.41
XRCC3-212ENST00000555231 TARM1B6A8C7 271 aa12.49□□□□□ -0.41
XRCC3-212ENST00000555231 SRPX2O60687 465 aaPredicted RBP12.49□□□□□ -0.41
XRCC3-212ENST00000555231 KRT38O76015 456 aa12.49□□□□□ -0.41
XRCC3-212ENST00000555231 WFS1O76024 890 aa12.49□□□□□ -0.41
XRCC3-212ENST00000555231 WISP2O76076 250 aa12.49□□□□□ -0.41
XRCC3-212ENST00000555231 TJP3O95049 919 aa12.49□□□□□ -0.41
XRCC3-212ENST00000555231 WDPCPO95876 746 aa12.49□□□□□ -0.41
XRCC3-212ENST00000555231 SERPINA7P05543 415 aa12.49□□□□□ -0.41
XRCC3-212ENST00000555231 APOA4P06727 396 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms