RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TRBV5-4A0A0C4DH59 114 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 GLYATL1P3A0A0U1RQE8 302 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 AGAP14A8MT82 685 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 SLC31A1O15431 190 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A9O60656 530 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 ERLIN1O75477 346 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 SRP72O76094 671 aaKnown RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 PAK4O96013 591 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 SHBGP04278 402 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 AMY1AP04745 511 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 F7P08709 466 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A6P19224 532 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A1P22309 533 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A4P22310 534 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 MAT2AP31153 395 aaKnown RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 STX2P32856 288 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A3P35503 534 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A5P35504 534 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 CACNG1Q06432 222 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 DPTQ07507 201 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 NFATC2Q13469 925 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 SEMA3AQ14563 771 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 IRF4Q15306 451 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UAP1L1Q3KQV9 507 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 KBTBD12Q3ZCT8 623 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 ATP13A5Q4VNC0 1218 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 USP39Q53GS9 565 aaKnown RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 HSP90AA5PQ58FG0 334 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 SPDYCQ5MJ68 293 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 ZDHHC20Q5W0Z9 365 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 PDPK2PQ6A1A2 396 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 NXNQ6DKJ4 435 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 NEPROQ6NW34 567 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF449Q6P9G9 518 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 KDM7AQ6ZMT4 941 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 PTAR1Q7Z6K3 402 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 KCNMB4Q86W47 210 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 IQCKQ8N0W5 287 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 TRAM1L1Q8N609 369 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 GPR150Q8NGU9 434 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 OR4L1Q8NH43 312 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF398Q8TD17 642 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 DTX3LQ8TDB6 740 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UBLCP1Q8WVY7 318 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 ANKRD7Q92527 254 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 NELL1Q92832 810 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 DVL3Q92997 716 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 CENPTQ96BT3 561 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 NUS1Q96E22 293 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 KLF6Q99612 283 aaPredicted RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 SPATA16Q9BXB7 569 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 SLC17A9Q9BYT1 436 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 KCNH6Q9H252 994 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 EBF2Q9HAK2 575 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A7Q9HAW7 530 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A10Q9HAW8 530 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 UGT1A8Q9HAW9 530 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 ARFGAP3Q9NP61 516 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 FZD3Q9NPG1 666 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 MBNL1Q9NR56 388 aaKnown RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 IARS2Q9NSE4 1012 aaKnown RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 FBXO4Q9UKT5 387 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 PSAT1Q9Y617 370 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 NFS1Q9Y697 457 aa6.2□□□□□ -1.42
SCFD1-212ENST00000554486 TNRC6BQ9UPQ9 1833 aaKnown RBP6.2□□□□□ -1.42
SCFD1-212ENST00000554486 CACNA1EQ15878 2313 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CD3EAPO15446 510 aaKnown RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 FAM155BO75949 473 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 GASTP01350 101 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 PCCBP05166 539 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 NUDT17P0C025 328 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SP9P0CG40 484 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 GYPEP15421 78 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ITGALP20701 1170 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 TEAD1P28347 426 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 GABRB3P28472 473 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 GCAP28676 217 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CRHR1P34998 444 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 PHBP35232 272 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SLC1A2P43004 574 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SLC16A1P53985 500 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CLDN2P57739 230 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 MPP1Q00013 466 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 DUSP2Q05923 314 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 FOXL1Q12952 345 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 TARDBPQ13148 414 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SRSF5Q13243 272 aaKnown RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SGCGQ13326 291 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CTBP1Q13363 440 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 THOC5Q13769 683 aaKnown RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF267Q14586 743 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CASP8Q14790 479 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CSRP2Q16527 193 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 TYSND1Q2T9J0 566 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 KHDC1Q4VXA5 237 aaKnown RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ZRANB3Q5FWF4 1079 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF789Q5FWF6 425 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 PRAMEF14Q5SWL7 426 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF470Q6ECI4 717 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 PNCKQ6P2M8 343 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms