RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ZFXP17010 805 aaPredicted RBP12.28□□□□□ -0.44
VPS29-211ENST00000553128 ADRA1AP35348 466 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 ARHGAP25P42331 645 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 FOXD4Q12950 439 aaPredicted RBP12.28□□□□□ -0.44
VPS29-211ENST00000553128 GRB7Q14451 532 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 DBN1Q16643 649 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 TCTE1Q5JU00 501 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 ABHD17BQ5VST6 288 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 FCRLBQ6BAA4 426 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 RANBP10Q6VN20 620 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 RIPOR1Q6ZS17 1223 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 TMEM200AQ86VY9 491 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 VSIG1Q86XK7 387 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 OR4N4Q8N0Y3 316 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 DNAAF3Q8N9W5 541 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 HEXDCQ8WVB3 486 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 ELMO1Q92556 727 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 DNAJC1Q96KC8 554 aaKnown RBP12.28□□□□□ -0.44
VPS29-211ENST00000553128 C10orf90Q96M02 699 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 KLHL1Q9NR64 748 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 CCM2LQ9NUG4 571 aaPredicted RBP12.28□□□□□ -0.44
VPS29-211ENST00000553128 ANKRD10Q9NXR5 420 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 IL1RAPL1Q9NZN1 696 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.28□□□□□ -0.44
VPS29-211ENST00000553128 ZC3H7BQ9UGR2 993 aaKnown RBP12.28□□□□□ -0.44
VPS29-211ENST00000553128 RSPH14Q9UHP6 348 aa12.28□□□□□ -0.44
VPS29-211ENST00000553128 RPH3AQ9Y2J0 694 aaPredicted RBP12.28□□□□□ -0.44
VPS29-211ENST00000553128 SLC5A10A0PJK1 596 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 NKX2-6A6NCS4 301 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 MAN1A2O60476 641 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 SERPING1P05155 500 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 FBLP22087 321 aaKnown RBP12.27□□□□□ -0.45
VPS29-211ENST00000553128 CXCR2P25025 360 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 CSE1LP55060 971 aaKnown RBP12.27□□□□□ -0.45
VPS29-211ENST00000553128 ALDH6A1Q02252 535 aaKnown RBP12.27□□□□□ -0.45
VPS29-211ENST00000553128 TFF3Q07654 80 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 FAM214AQ32MH5 1076 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 KRTCAP3Q53RY4 240 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 ZC3H12BQ5HYM0 836 aaKnown RBP12.27□□□□□ -0.45
VPS29-211ENST00000553128 Q71RC1 249 aaPredicted RBP12.27□□□□□ -0.45
VPS29-211ENST00000553128 TAS2R42Q7RTR8 314 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 SHISA5Q8N114 240 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 BEST3Q8N1M1 668 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 MARVELD2Q8N4S9 558 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 PHF10Q8WUB8 498 aaKnown RBP12.27□□□□□ -0.45
VPS29-211ENST00000553128 HAUS1Q96CS2 278 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 IMMP1LQ96LU5 166 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 FOXC2Q99958 501 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 TRIM51Q9BSJ1 452 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 UCK2Q9BZX2 261 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 ZNF700Q9H0M5 742 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 LIME1Q9H400 295 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 SYNPO2LQ9H987 977 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 RIC8BQ9NVN3 520 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 ANO10Q9NW15 660 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 UVRAGQ9P2Y5 699 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 PPT2Q9UMR5 302 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 ASB1Q9Y576 335 aa12.27□□□□□ -0.45
VPS29-211ENST00000553128 LOC102723996A0A087X1L8 192 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 IGHV3-20A0A0C4DH32 117 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 A0A0J9YVX5 310 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 KRT87PA6NCN2 255 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 ASPDHA6ND91 283 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 A8MUI8 341 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 E9PLN8 166 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 ASNA1O43681 348 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 CST8O60676 142 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.451e-7■■■■□ 19.3
VPS29-211ENST00000553128 EIF2S1P05198 315 aaKnown RBP12.26□□□□□ -0.45
VPS29-211ENST00000553128 TNNT1P13805 278 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 ABOP16442 354 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 PSMB5P28074 263 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 NR2C2P49116 596 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 YBX1P67809 324 aaKnown RBP12.26□□□□□ -0.45
VPS29-211ENST00000553128 TUBA3CQ13748 450 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 SF1Q15637 639 aaKnown RBP12.26□□□□□ -0.45
VPS29-211ENST00000553128 STX1AQ16623 288 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 GPR33Q49SQ1 333 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 RNFT1Q5M7Z0 435 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 KAZNQ674X7 775 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 DENND5AQ6IQ26 1287 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 TUBA3EQ6PEY2 450 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 VRK3Q8IV63 474 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 MDS2Q8NDY4 140 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 FRMD6Q96NE9 622 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 NPAS2Q99743 824 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 VKORC1Q9BQB6 163 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 YIPF2Q9BWQ6 316 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 LUC7LQ9NQ29 371 aaKnown RBP12.26□□□□□ -0.45
VPS29-211ENST00000553128 SMARCAL1Q9NZC9 954 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 IMPACTQ9P2X3 320 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 TRPC4Q9UBN4 977 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 HYOU1Q9Y4L1 999 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 HRH3Q9Y5N1 445 aa12.26□□□□□ -0.45
VPS29-211ENST00000553128 BZW2Q9Y6E2 419 aaKnown RBP12.26□□□□□ -0.45
VPS29-211ENST00000553128 A0A1B0GTH6 734 aa12.25□□□□□ -0.45
VPS29-211ENST00000553128 FAM90A27PA6NNH2 459 aa12.25□□□□□ -0.45
VPS29-211ENST00000553128 TTI1O43156 1089 aa12.25□□□□□ -0.45
VPS29-211ENST00000553128 AP2A2O94973 939 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms