RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 AADATQ8N5Z0 425 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 MINDY2Q8NBR6 621 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 PROX1Q92786 737 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ZNF300Q96RE9 604 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 HEBP1Q9NRV9 189 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 DCAF13Q9NV06 445 aaKnown RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 TMEM248Q9NWD8 314 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 WWOXQ9NZC7 414 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ZNF490Q9ULM2 529 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 SAMHD1Q9Y3Z3 626 aaKnown RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 SNX8Q9Y5X2 465 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ARNTLO00327 626 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ULK1O75385 1050 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 RFPL2O75678 378 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 SCELO95171 688 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 TSPAN12O95859 305 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 C1QCP02747 245 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 DAPP51397 102 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 NUDT6P53370 316 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 SLC35A2P78381 396 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 TWF1Q12792 350 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 SERINC3Q13530 473 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ACOX1Q15067 660 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 GPR153Q6NV75 609 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ZCCHC8Q6NZY4 707 aaKnown RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ANKRD33Q7Z3H0 272 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 LYSMD2Q8IV50 215 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 MSRB3Q8IXL7 192 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ATP6V0D2Q8N8Y2 350 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 TPD52L3Q96J77 140 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 APOL4Q9BPW4 351 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 INPP5KQ9BT40 448 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 CINPQ9BW66 212 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 SLIRPQ9GZT3 109 aaKnown RBP12.05□□□□□ -0.48
HDAC7-230ENST00000552960 CWH43Q9H720 699 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 PARVBQ9HBI1 364 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ACOT13Q9NPJ3 140 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 TLR6Q9Y2C9 796 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 ZNF451Q9Y4E5 1061 aa12.05□□□□□ -0.48
HDAC7-230ENST00000552960 A8MV72 311 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 OR7A17O14581 309 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 HOXD11P31277 338 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 S100A5P33763 92 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 HTR7P34969 479 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 PRMT2P55345 433 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 IL10RBQ08334 325 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 TYSND1Q2T9J0 566 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 ZNF404Q494X3 552 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 CTSL3PQ5NE16 218 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 PTRHD1Q6GMV3 140 aaKnown RBP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 DOK6Q6PKX4 331 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 SIX5Q8N196 739 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 FBXO22Q8NEZ5 403 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 FBXO32Q969P5 355 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 TRIM43Q96BQ3 446 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 PYURFQ96I23 114 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 PPP3R2Q96LZ3 170 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 TTPALQ9BTX7 342 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 ELAC1Q9H777 363 aaKnown RBP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 FBXO8Q9NRD0 319 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 KRT84Q9NSB2 600 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 MARCH2Q9P0N8 246 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 USP34Q70CQ2 3546 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 ANKRD28O15084 1053 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 RGS14O43566 566 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 UPK1BO75841 260 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 CCNKO75909 580 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 OTCP00480 354 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 VIPP01282 170 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 KRT8P05787 483 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 AQP1P29972 269 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 KCNQ1P51787 676 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 FXNQ16595 210 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 TMC5Q6UXY8 1006 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 MBOAT1Q6ZNC8 495 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 OTOP2Q7RTS6 562 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 CLDN19Q8N6F1 224 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 ATL1Q8WXF7 558 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 REXO5Q96IC2 774 aaKnown RBP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 DHRS1Q96LJ7 313 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 SH3GL1Q99961 368 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 LATS2Q9NRM7 1088 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 NLE1Q9NVX2 485 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 C1orf109Q9NX04 203 aa12.04□□□□□ -0.48
HDAC7-230ENST00000552960 GOLGA4Q13439 2230 aaKnown RBP12.04□□□□□ -0.48
HDAC7-230ENST00000552960 A8MX80 341 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 CBX4O00257 560 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 SYN3O14994 580 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 FFAR2O15552 330 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 KCNK2O95069 426 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 CXCL10P02778 98 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 MZF1P28698 734 aaPredicted RBP12.03□□□□□ -0.48
HDAC7-230ENST00000552960 S100A3P33764 101 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 RYKP34925 604 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 KRT20P35900 424 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 LIPAP38571 399 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 EIF2DP41214 584 aaKnown RBP12.03□□□□□ -0.48
HDAC7-230ENST00000552960 GNPDA1P46926 289 aa12.03□□□□□ -0.48
HDAC7-230ENST00000552960 ACVR1Q04771 509 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms