RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 EURLQ9NYK6 297 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 TCAF1Q9Y4C2 921 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 OTOGQ6ZRI0 2925 aa11.38□□□□□ -0.59
CKAP4-202ENST00000552828 APCP25054 2843 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 CCDC78A2IDD5 438 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 DYNC1I1O14576 645 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 KDM1AO60341 852 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 URI1O94763 535 aaPredicted RBP11.37□□□□□ -0.59
CKAP4-202ENST00000552828 MLNP12872 115 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 MGAT1P26572 445 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 GLRBP48167 497 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 ARSFP54793 590 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 FOXL2P58012 376 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 CKAP4Q07065 602 aaKnown RBP11.37□□□□□ -0.59
CKAP4-202ENST00000552828 SLC9A5Q14940 896 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 PRAMEF13Q5VWM6 474 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 ARMC3Q5W041 872 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 ZNF534Q76KX8 674 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 OVCH1Q7RTY7 1134 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 KCNMB4Q86W47 210 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 SLC34A3Q8N130 599 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 NAT8LQ8N9F0 302 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 DENND1AQ8TEH3 1009 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 DLG3Q92796 817 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 MENTQ9BUN1 341 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 SLC6A20Q9NP91 592 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 CHRAC1Q9NRG0 131 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 CDC23Q9UJX2 597 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 FBXL4Q9UKA2 621 aa11.37□□□□□ -0.59
CKAP4-202ENST00000552828 TDRKHQ9Y2W6 561 aaKnown RBP11.37□□□□□ -0.59
CKAP4-202ENST00000552828 TEP1Q99973 2627 aaKnown RBP11.37□□□□□ -0.59
CKAP4-202ENST00000552828 PIKFYVEQ9Y2I7 2098 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 CACNA1DQ01668 2161 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 A0A1B0GX78 115 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 MAGEB16A2A368 324 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 CCDC162PA2VCL2 907 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 SDR42E2A6NKP2 422 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 ISM1B1AKI9 464 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 GOLGA8MH3BSY2 632 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 E2F3O00716 465 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 SOCS6O14544 535 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 DNALI1O14645 258 aaPredicted RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 TTI1O43156 1089 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 AVILO75366 819 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 OR56A5P0C7T3 313 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 ALAS2P22557 587 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 ITGA3P26006 1051 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 PKLRP30613 574 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 FOXN2P32314 431 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 TSFMP43897 325 aaKnown RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 RAB28P51157 221 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 PRAMEP78395 509 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 CRADDP78560 199 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 ACVR1Q04771 509 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 NKG7Q16617 165 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 DNAJC21Q5F1R6 531 aaKnown RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 RNASEH2BQ5TBB1 312 aaKnown RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 AGAP7PQ5VUJ5 663 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 YOD1Q5VVQ6 348 aaPredicted RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 C1QL3Q5VWW1 255 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 B3GNTL1Q67FW5 361 aaPredicted RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 KIRREL2Q6UWL6 708 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 MAATS1Q7Z4T9 603 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 CAND1Q86VP6 1230 aaKnown RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 MCATQ8IVS2 390 aaKnown RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 SLC22A15Q8IZD6 547 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 LINC01555Q8NAE3 123 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 OR13J1Q8NGT2 312 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 OR6P1Q8NGX9 317 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 HDAC10Q969S8 669 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 ZNF285Q96NJ3 590 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 SERPINB12Q96P63 405 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 AGAP4Q96P64 663 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 SPSB2Q99619 263 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 KIFC1Q9BW19 673 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 MRM3Q9HC36 420 aaKnown RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 SLC2A6Q9UGQ3 507 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
CKAP4-202ENST00000552828 CSAG2Q9Y5P2 127 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 FER1L5A0AVI2 2057 aa11.36□□□□□ -0.59
CKAP4-202ENST00000552828 FITM1A5D6W6 292 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 DSCR3O14972 297 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 GPC4O75487 556 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 PIM1P11309 404 aaPredicted RBP11.35□□□□□ -0.59
CKAP4-202ENST00000552828 EDN3P14138 238 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 MAGP20916 626 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 CD9P21926 228 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 IVDP26440 423 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 GRB7Q14451 532 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 BRD3Q15059 726 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 HIF1AQ16665 826 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 WHAMMP3Q1A5X7 153 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 SYTL3Q4VX76 610 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 CASC4Q6P4E1 433 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 AFTPHQ6ULP2 937 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 NAPRTQ6XQN6 538 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 TTLL10Q6ZVT0 673 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 COX15Q7KZN9 410 aa11.35□□□□□ -0.59
CKAP4-202ENST00000552828 MTERF4Q7Z6M4 381 aaKnown RBP11.35□□□□□ -0.59
CKAP4-202ENST00000552828 OR4L1Q8NH43 312 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms