RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 BMP7P18075 431 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 MSH3P20585 1137 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 SHMT2P34897 504 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 ZFP36L2P47974 494 aaKnown RBP11.79□□□□□ -0.52
SNRPF-204ENST00000552085 ST13P50502 369 aaKnown RBP11.79□□□□□ -0.52
SNRPF-204ENST00000552085 FASTKQ14296 549 aaKnown RBP11.79□□□□□ -0.52
SNRPF-204ENST00000552085 PPP2R5EQ16537 467 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 FAM214AQ32MH5 1076 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 FCRLBQ6BAA4 426 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 SLC25A25Q6KCM7 469 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 FAM151BQ6UXP7 276 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 UNC5AQ6ZN44 842 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 IRF2BP2Q7Z5L9 587 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 LRRC75A-AS1Q8N1F1 130 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 HORMAD2Q8N7B1 307 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 OR5M3Q8NGP4 307 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 HSPH1Q92598 858 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 LINC00615Q96LM1 132 aaPredicted RBP11.79□□□□□ -0.52
SNRPF-204ENST00000552085 IMMP1LQ96LU5 166 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 TRIB3Q96RU7 358 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 OLFM1Q99784 485 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 TUBB6Q9BUF5 446 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 PCDH18Q9HCL0 1135 aa11.79□□□□□ -0.52
SNRPF-204ENST00000552085 MRPL47Q9HD33 250 aaKnown RBP11.79□□□□□ -0.52
SNRPF-204ENST00000552085 TRIM64A6NGJ6 449 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 TRIM64BA6NI03 449 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 IFRD1O00458 451 aaPredicted RBP11.78□□□□□ -0.52
SNRPF-204ENST00000552085 PHF1O43189 567 aaPredicted RBP11.78□□□□□ -0.52
SNRPF-204ENST00000552085 CDC40O60508 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
SNRPF-204ENST00000552085 SUN1O94901 812 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 BOP1Q14137 746 aaKnown RBP11.78□□□□□ -0.52
SNRPF-204ENST00000552085 PAFAH1B3Q15102 231 aaKnown RBP11.78□□□□□ -0.52
SNRPF-204ENST00000552085 MAPKAPK3Q16644 382 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 IFI16Q16666 785 aaKnown RBP11.78□□□□□ -0.52
SNRPF-204ENST00000552085 MEP1AQ16819 746 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 SLC25A35Q3KQZ1 300 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 BCL7AQ4VC05 210 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 EMC4Q5J8M3 183 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 TCTE1Q5JU00 501 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 H3F3CQ6NXT2 135 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 PRSS57Q6UWY2 283 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 NT5DC3Q86UY8 548 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 LIX1LQ8IVB5 337 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 FAM71BQ8TC56 605 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 HM13Q8TCT9 377 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 NAT14Q8WUY8 206 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 ERGIC2Q96RQ1 377 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 ENAMQ9NRM1 1142 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 MYO6Q9UM54 1294 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 SPO11Q9Y5K1 396 aa11.78□□□□□ -0.52
SNRPF-204ENST00000552085 FITM1A5D6W6 292 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 TMCO5BA8MYB1 307 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 ISM1B1AKI9 464 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 TFECO14948 347 aaPredicted RBP11.77□□□□□ -0.53
SNRPF-204ENST00000552085 PRMT3O60678 531 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 NEURL1O76050 574 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 FTLP02792 175 aaPredicted RBP11.77□□□□□ -0.53
SNRPF-204ENST00000552085 HEXBP07686 556 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 MYBL1P10243 752 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 TCF4P15884 667 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 TFEBP19484 476 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 MAGP20916 626 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 UQCRC1P31930 480 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 HMGCLP35914 325 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 CD151P48509 253 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 OC90Q02509 493 aaPredicted RBP11.77□□□□□ -0.53
SNRPF-204ENST00000552085 ITGA9Q13797 1035 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 CATSPEREQ5SY80 951 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 CCDC122Q5T0U0 273 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 ZDHHC20Q5W0Z9 365 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 PRMT9Q6P2P2 845 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 UNC5DQ6UXZ4 953 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 YTHDF3Q7Z739 585 aaKnown RBP11.77□□□□□ -0.53
SNRPF-204ENST00000552085 SRPK1Q96SB4 655 aaKnown RBP11.77□□□□□ -0.53
SNRPF-204ENST00000552085 OR52A5Q9H2C5 316 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.77□□□□□ -0.53
SNRPF-204ENST00000552085 KLHL20Q9Y2M5 609 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 ARHGAP21Q5T5U3 1957 aa11.77□□□□□ -0.53
SNRPF-204ENST00000552085 ZNF407Q9C0G0 2248 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 A0A0G2JNJ9 132 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 GLYATL1P3A0A0U1RQE8 302 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 LRRC10BA6NIK2 292 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 LGALS16A8MUM7 142 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 DDX3XO00571 662 aaKnown RBP eCLIP11.76□□□□□ -0.535e-45■■■□□ 18.1
SNRPF-204ENST00000552085 MFSD11O43934 449 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 SMPD2O60906 423 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 MED26O95402 600 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 MX2P20592 715 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 FBLP22087 321 aaKnown RBP11.76□□□□□ -0.53
SNRPF-204ENST00000552085 PIGHQ14442 188 aaPredicted RBP11.76□□□□□ -0.53
SNRPF-204ENST00000552085 ZC3H12BQ5HYM0 836 aaKnown RBP11.76□□□□□ -0.53
SNRPF-204ENST00000552085 CCDC183Q5T5S1 534 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 TMEM205Q6UW68 189 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 CRLF3Q8IUI8 442 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 ULK2Q8IYT8 1036 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 NIPA2Q8N8Q9 360 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 POGLUT1Q8NBL1 392 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 ZNF592Q92610 1267 aa11.76□□□□□ -0.53
SNRPF-204ENST00000552085 TFGQ92734 400 aaPredicted RBP11.76□□□□□ -0.53
SNRPF-204ENST00000552085 TRIM11Q96F44 468 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms