RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 KIAA1614Q5VZ46 1190 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 SULT1C3Q6IMI6 304 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 ARMC6Q6NXE6 501 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 KLC3Q6P597 504 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 HDXQ7Z353 690 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 PRSS42Q7Z5A4 293 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 LCA5Q86VQ0 697 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 TMPRSS12Q86WS5 348 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 KLHDC8AQ8IYD2 350 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 RAB42Q8N4Z0 105 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 RCBTB1Q8NDN9 531 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 KLHL6Q8WZ60 621 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 ZDHHC12Q96GR4 267 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 SCYL1Q96KG9 808 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 TRAPPC9Q96Q05 1148 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 EGFL8Q99944 293 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 MRPL57Q9BQC6 102 aaKnown RBP12.58□□□□□ -0.4
RAB5C-206ENST00000550406 ACAT2Q9BWD1 397 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 PITPNM3Q9BZ71 974 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 KLHL25Q9H0H3 589 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 NUDT4Q9NZJ9 180 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 CD274Q9NZQ7 290 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 CPSF2Q9P2I0 782 aaKnown RBP12.58□□□□□ -0.4
RAB5C-206ENST00000550406 DCDC2Q9UHG0 476 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 KLHL20Q9Y2M5 609 aa12.58□□□□□ -0.4
RAB5C-206ENST00000550406 IGKV1-8A0A0C4DH67 115 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 A0A0J9YY10 115 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 PMS2P1A4D2B8 440 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 LRRC14BA6NHZ5 514 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 SLC9B1P1A6NJY1 282 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 AGRPO00253 132 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 MATN2O00339 956 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 HYAL3O43820 417 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-206ENST00000550406 GLRA3O75311 464 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 PROCP04070 461 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 ST6GAL1P15907 406 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 SEPHS1P49903 392 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 TRA2AQ13595 282 aaKnown RBP eCLIP12.57□□□□□ -0.4
RAB5C-206ENST00000550406 TSTA3Q13630 321 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-206ENST00000550406 SF1Q15637 639 aaKnown RBP12.57□□□□□ -0.4
RAB5C-206ENST00000550406 SLC5A12Q1EHB4 618 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 PHF19Q5T6S3 580 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 FCRL6Q6DN72 434 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 FRA10AC1Q70Z53 315 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 DGLUCYQ7Z3D6 616 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 CROCCP2Q86T23 111 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 OR2L3Q8NG85 312 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 ARL8AQ96BM9 186 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 ALKBH8Q96BT7 664 aaKnown RBP12.57□□□□□ -0.4
RAB5C-206ENST00000550406 TMEM74Q96NL1 305 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 DEPDC7Q96QD5 511 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 CD180Q99467 661 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 MIPEPQ99797 713 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 MRPL46Q9H2W6 279 aaKnown RBP12.57□□□□□ -0.4
RAB5C-206ENST00000550406 CENPHQ9H3R5 247 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 VIPAS39Q9H9C1 493 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 SLC6A20Q9NP91 592 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 C1GALT1Q9NS00 363 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 ABCF3Q9NUQ8 709 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 MKS1Q9NXB0 559 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 TAC3Q9UHF0 121 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 PCDHB11Q9Y5F2 797 aa12.57□□□□□ -0.4
RAB5C-206ENST00000550406 SPTBP11277 2137 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 ZNF839A8K0R7 811 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 SYCE1LA8MT33 242 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 G3V2L1 256 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 COPEO14579 308 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 TOX3O15405 576 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 HCRTR1O43613 425 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 TYROBPO43914 113 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 NRP2O60462 931 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 DLX3O60479 287 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 PLIN3O60664 434 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 PRAMEF4O60810 478 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 ANKRD34CP0C6C1 535 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 JUPP14923 745 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 CDH3P22223 829 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 RPA3P35244 121 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 CCT5P48643 541 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 HSPA7P48741 367 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 HNMTP50135 292 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 PRDX1Q06830 199 aaKnown RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 FOXC1Q12948 553 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 MPP2Q14168 576 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 PFKFB4Q16877 469 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 PRAMEF9Q5VWM5 478 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 PRAMEF13Q5VWM6 474 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 ICE2Q659A1 982 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 CAPN13Q6MZZ7 669 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 FIGLAQ6QHK4 219 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 LCTLQ6UWM7 567 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 THOC6Q86W42 341 aaKnown RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 UBTD2Q8WUN7 234 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 ATL1Q8WXF7 558 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 TLCD1Q96CP7 247 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 MED8Q96G25 268 aa12.56□□□□□ -0.4
RAB5C-206ENST00000550406 PRR11Q96HE9 360 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-206ENST00000550406 APOPT1Q96IL0 206 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms