RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 CXCR5P32302 372 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 EMP3P54852 163 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 RELAQ04206 551 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 AIMP2Q13155 320 aaKnown RBP10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 DHX34Q14147 1143 aaKnown RBP10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 NADK2Q4G0N4 442 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 IRAK1BP1Q5VVH5 260 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 FCRL6Q6DN72 434 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 CILP2Q8IUL8 1156 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 C2orf73Q8N5S3 287 aaPredicted RBP10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 OR2L3Q8NG85 312 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 OR9A1PQ8NGU1 263 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 GRK7Q8WTQ7 553 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 COG1Q8WTW3 980 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 SMPDL3AQ92484 453 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 NUDT9Q9BW91 350 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 SEMA3GQ9NS98 782 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 CDC14AQ9UNH5 594 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 CRYL1Q9Y2S2 319 aa10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 UBR5O95071 2799 aaPredicted RBP10.43□□□□□ -0.74
VTI1BP3-201ENST00000550220 HECTD1Q9ULT8 2610 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 GOLGA6L10A0A0M3HER8 536 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 HYKKA2RU49 373 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 TXNDC9O14530 226 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 PRPF4O43172 522 aaKnown RBP eCLIP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 PSIP1O75475 530 aaKnown RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CCNDBP1O95273 360 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 ENO3P13929 434 aaPredicted RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 RPA3P35244 121 aaPredicted RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 COILP38432 576 aaPredicted RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CARSP49589 748 aaKnown RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 ABATP80404 500 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CCZ1BP86790 482 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CCZ1P86791 482 aaPredicted RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 OCA2Q04671 838 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 GBX1Q14549 363 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 TRIP13Q15645 432 aaPredicted RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 INPP5JQ15735 1006 aaPredicted RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 NKG7Q16617 165 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CYP1B1Q16678 543 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 MUM1Q2TAK8 710 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 WASHC2DQ5SRD0 308 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 FHL5Q5TD97 284 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 FAM69BQ5VUD6 431 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 LRRC8EQ6NSJ5 796 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CNSTQ6PJW8 725 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CCDC137Q6PK04 289 aaKnown RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CES3Q6UWW8 571 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 PPP1R32Q7Z5V6 425 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 TAX1BP1Q86VP1 789 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 FAM20CQ8IXL6 584 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 IQCKQ8N0W5 287 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZADH2Q8N4Q0 377 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 FBXO15Q8NCQ5 510 aaPredicted RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 OR2A1Q8NGT9 310 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 KCNJ9Q92806 393 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 MIPEPQ99797 713 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 EBNA1BP2Q99848 306 aaKnown RBP10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 CDC23Q9UJX2 597 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 KLHL20Q9Y2M5 609 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 NFS1Q9Y697 457 aa10.42□□□□□ -0.74
VTI1BP3-201ENST00000550220 TCRBV7S3A2A0A539 114 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 GOLGA8KD6RF30 607 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 GOLGA8TH3BQL2 631 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 MYO1CO00159 1063 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 PGRMC1O00264 195 aaKnown RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 EIF3FO00303 357 aaPredicted RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 PCDH17O14917 1159 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZSCAN12O43309 604 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZBTB14O43829 449 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 NIPSNAP2O75323 286 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 AVILO75366 819 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 USP1O94782 785 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 CTSBP07858 339 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 UMODP07911 640 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ERVK-10P10266 1014 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ERGP11308 486 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 HRH2P25021 359 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 BDKRB1P46663 353 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 FNTAP49354 379 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 VPS41P49754 854 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 VSX2P58304 361 aaPredicted RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 PRDX1Q06830 199 aaKnown RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 SRSF1Q07955 248 aaKnown RBP eCLIP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 SLC9A5Q14940 896 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 LONRF1Q17RB8 773 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 KLHL38Q2WGJ6 581 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 GARNL3Q5VVW2 1013 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 SLC6A19Q695T7 634 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 UGT3A1Q6NUS8 523 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 CENPUQ71F23 418 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 RNF44Q7L0R7 432 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 PCGF5Q86SE9 256 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 CAND1Q86VP6 1230 aaKnown RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 RBMXL3Q8N7X1 1067 aaKnown RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ACTRT1Q8TDG2 376 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 INPP5DQ92835 1189 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 COL26A1Q96A83 441 aa10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 ZNF669Q96BR6 464 aaPredicted RBP10.41□□□□□ -0.74
VTI1BP3-201ENST00000550220 MVB12AQ96EY5 273 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms