RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LEFTY2O00292 366 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 TGM5O43548 720 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 PRR35P0CG20 571 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 IGFBP5P24593 272 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 ALDH3B2P48448 385 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 FOXM1Q08050 763 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 SMARCB1Q12824 385 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 MADCAM1Q13477 382 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 RAPSNQ13702 412 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 MSRB3Q8IXL7 192 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 MFSD2AQ8NA29 543 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 TMEM159Q96B96 161 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 FAM118AQ9NWS6 357 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 SLC25A13Q9UJS0 675 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 SNX6Q9UNH7 406 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 MGAT4DA6NG13 374 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 C16orf96A6NNT2 1141 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 TTC34A8MYJ7 566 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 BCKDKO14874 412 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 ALPLP05186 524 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 UMPSP11172 480 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 HLA-EP13747 358 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 SDC1P18827 310 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 TGFBR1P36897 503 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 SYT16Q17RD7 645 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 ADHFE1Q8IWW8 467 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 ZNF540Q8NDQ6 660 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 ZNF548Q8NEK5 533 aaPredicted RBP13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 ADAMTS19Q8TE59 1207 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 RMND5AQ9H871 391 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 AASDHPPTQ9NRN7 309 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 TBC1D23Q9NUY8 699 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 PLAGL1Q9UM63 463 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 HCFC2Q9Y5Z7 792 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 A0A0G2JN53 185 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 E7EQ34 232 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 CLIC1O00299 241 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 AREL1O15033 823 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 TSPAN6O43657 245 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 TGFB1P01137 390 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 B4GALNT1Q00973 533 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 NR1D2Q14995 579 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 CTU2Q2VPK5 515 aaKnown RBP13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 AHSA2Q719I0 299 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 SPRED1Q7Z699 444 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 DTNBP1Q96EV8 351 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 MAGED4Q96JG8 741 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 ZFYVE19Q96K21 471 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 SLC46A2Q9BY10 475 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 SGK2Q9HBY8 427 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 HEBP1Q9NRV9 189 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 DNAJB9Q9UBS3 223 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 PPT2Q9UMR5 302 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 PTPRDP23468 1912 aa13.29□□□□□ -0.28
PRPF40B-209ENST00000548825 LOC100130705A0A1B0GUX0 176 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 LEFTY1O75610 366 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ANGPTL1O95841 491 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 IGHA2P01877 340 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 LAMP1P11279 417 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 PDHA2P29803 388 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 PTGER1P34995 402 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ALDH9A1P49189 494 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 USP39Q53GS9 565 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 LY6G5CQ5SRR4 150 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ALG1LQ6GMV1 187 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 C22orf39Q6P5X5 142 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 C1orf52Q8N6N3 182 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 EPB41L1Q9H4G0 881 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 MOSPD1Q9UJG1 213 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 SH3GLB1Q9Y371 365 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 GMPPBQ9Y5P6 360 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ST14Q9Y5Y6 855 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 NLRC5Q86WI3 1866 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 TRAV19A0A0A6YYK7 116 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 M0R3G1 203 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 EPN2O95208 641 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 BMP10O95393 424 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 IL6P05231 212 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 DCTP40126 519 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 VBP1P61758 197 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 MAD2L1Q13257 205 aaPredicted RBP13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 FRG2Q64ET8 278 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 TPRG1Q6ZUI0 275 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 CEP68Q76N32 757 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ELMOD1Q8N336 334 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 SMYD1Q8NB12 490 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 PXYLP1Q8TE99 480 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 C2orf15Q8WU43 125 aaKnown RBP13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 FATE1Q969F0 183 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 FRG2BQ96QU4 278 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 HTATIP2Q9BUP3 242 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 FAM83DQ9H4H8 585 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ZDHHC3Q9NYG2 299 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 SPG21Q9NZD8 308 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ERVK-18Q9QC07 812 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 RHCGQ9UBD6 479 aa13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 PIM1P11309 404 aaPredicted RBP13.28□□□□□ -0.28
PRPF40B-209ENST00000548825 ACPPP15309 386 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms