RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 GSDMBQ8TAX9 411 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 CDKN2AIPNLQ96HQ2 116 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 MAGED4Q96JG8 741 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 RNF32Q9H0A6 362 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 GPAMQ9HCL2 828 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 INTUQ9ULD6 942 aa16.16■□□□□ 0.18
VPS29-204ENST00000548259 MTORP42345 2549 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 ITPR3Q14573 2671 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 BHMG1C9JSJ3 638 aaPredicted RBP16.15■□□□□ 0.18
VPS29-204ENST00000548259 SLC19A2O60779 497 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 FBLP22087 321 aaKnown RBP16.15■□□□□ 0.18
VPS29-204ENST00000548259 MCM3P25205 808 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 PPARGP37231 505 aaPredicted RBP16.15■□□□□ 0.18
VPS29-204ENST00000548259 EMP2P54851 167 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 VSX2P58304 361 aaPredicted RBP16.15■□□□□ 0.18
VPS29-204ENST00000548259 MSLNQ13421 630 aaPredicted RBP16.15■□□□□ 0.18
VPS29-204ENST00000548259 TCEAL1Q15170 157 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 MUM1Q2TAK8 710 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 WASHC2DQ5SRD0 308 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 FAAH2Q6GMR7 532 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 CDH24Q86UP0 819 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 CEP97Q8IW35 865 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 PIANPQ8IYJ0 282 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 OR2L8Q8NGY9 312 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 C8orf44Q96CB5 159 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 MTFMTQ96DP5 389 aaKnown RBP16.15■□□□□ 0.18
VPS29-204ENST00000548259 SPATA13Q96N96 652 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 ZNF285Q96NJ3 590 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 GORASP1Q9BQQ3 440 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 MRFAP1Q9Y605 127 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 ALG6Q9Y672 507 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 PKDREJQ9NTG1 2253 aa16.15■□□□□ 0.18
VPS29-204ENST00000548259 ANKRD12Q6UB98 2062 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 OR5H15A6NDH6 313 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 PRAMEF2O60811 474 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 CLDN14O95500 239 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 MSNP26038 577 aaKnown RBP16.14■□□□□ 0.17
VPS29-204ENST00000548259 DENND5AQ6IQ26 1287 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 DARS2Q6PI48 645 aaKnown RBP16.14■□□□□ 0.17
VPS29-204ENST00000548259 MYO7BQ6PIF6 2116 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 UNC5DQ6UXZ4 953 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 LINC01555Q8NAE3 123 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 ASZ1Q8WWH4 475 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 C14orf79Q96F83 325 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 DNAJC7Q99615 494 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 YIPF2Q9BWQ6 316 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 HEMGNQ9BXL5 484 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 C14orf105Q9NVL8 296 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 IFNKQ9P0W0 207 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 IMPACTQ9P2X3 320 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 ZC3H7BQ9UGR2 993 aaKnown RBP16.14■□□□□ 0.17
VPS29-204ENST00000548259 NF1P21359 2839 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 ZFHX3Q15911 3703 aa16.14■□□□□ 0.17
VPS29-204ENST00000548259 RASGRF2O14827 1237 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 FANCGO15287 622 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 WDPCPO95876 746 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 GAS8O95995 478 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 APOA4P06727 396 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 HEXBP07686 556 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 PRSS56P0CW18 603 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 RBP3P10745 1247 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 COX6A1P12074 109 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 CETN2P41208 172 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 CSE1LP55060 971 aaKnown RBP16.13■□□□□ 0.17
VPS29-204ENST00000548259 EIF3EP60228 445 aaKnown RBP16.13■□□□□ 0.17
VPS29-204ENST00000548259 COPS2P61201 443 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 HSPA14Q0VDF9 509 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 SPARCL1Q14515 664 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 TMED2Q15363 201 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 NAPRTQ6XQN6 538 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 LUZP1Q86V48 1076 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 TAX1BP1Q86VP1 789 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 SLC22A15Q8IZD6 547 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 ZNF295-AS1Q8N0V1 137 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 C2orf73Q8N5S3 287 aaPredicted RBP16.13■□□□□ 0.17
VPS29-204ENST00000548259 CFAP61Q8NHU2 1237 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 PSMF1Q92530 271 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 C10orf88Q9H8K7 445 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 LRRC40Q9H9A6 602 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 SPTLC3Q9NUV7 552 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 PRSS21Q9Y6M0 314 aa16.13■□□□□ 0.17
VPS29-204ENST00000548259 IDSB3KWA1 339 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 EIF2S1P05198 315 aaKnown RBP16.12■□□□□ 0.17
VPS29-204ENST00000548259 CD1EP15812 388 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 MST1P26927 711 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 POU6F1Q14863 301 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 KRTCAP3Q53RY4 240 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 HIBCHQ6NVY1 386 aaPredicted RBP16.12■□□□□ 0.17
VPS29-204ENST00000548259 ARHGEF18Q6ZSZ5 1173 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 EID3Q8N140 333 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 LMNTD1Q8N9Z9 388 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 ACTL9Q8TC94 416 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 MVB12AQ96EY5 273 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 MRFAP1L1Q96HT8 127 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 CABS1Q96KC9 395 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 SPOCK3Q9BQ16 436 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 NHEJ1Q9H9Q4 299 aaPredicted RBP16.12■□□□□ 0.17
VPS29-204ENST00000548259 STMN3Q9NZ72 180 aa16.12■□□□□ 0.17
VPS29-204ENST00000548259 TRPC4Q9UBN4 977 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms