RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ELMOD2Q8IZ81 293 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 RYBPQ8N488 228 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 FAM216AQ8WUB2 273 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 SHC3Q92529 594 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 MTERF3Q96E29 417 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 MED30Q96HR3 178 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 URB1-AS1Q96HZ7 61 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 FAM81BQ96LP2 452 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 SAMD8Q96LT4 415 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 GFM1Q96RP9 751 aaKnown RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 NTPCRQ9BSD7 190 aaKnown RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 CRACR2AQ9BSW2 395 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 RBM38Q9H0Z9 239 aaKnown RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 NAPBQ9H115 298 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 SNX25Q9H3E2 840 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 KLHL31Q9H511 634 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 GPN1Q9HCN4 374 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-210ENST00000547654 HHATLQ9HCP6 504 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 MYNNQ9NPC7 610 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 CNGB3Q9NQW8 809 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 TSPAN16Q9UKR8 245 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 KCNK6Q9Y257 313 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 NME7Q9Y5B8 376 aa4.07□□□□□ -1.76
SCAF11-210ENST00000547654 ABCA10Q8WWZ4 1543 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 ASTN2O75129 1339 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 MAGEA13PA6NCF6 341 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GPR89AB7ZAQ6 455 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 H0YCG3 227 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 O00370 1275 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 PLK4O00444 970 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 ATP9AO75110 1047 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 PALMO75781 387 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GAS8-AS1O95177 125 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 PDGFBP01127 241 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 IGKV3-20P01619 116 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GPR89BP0CG08 455 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 TSPY4P0CV99 314 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 TSPY10P0CW01 314 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 PRG2P13727 222 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 RPA1P27694 616 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 PSMB4P28070 264 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 BDKRB2P30411 391 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 IER3P46695 156 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 PPP3CCP48454 512 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 HNMTP50135 292 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 MAPK12P53778 367 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 MTCP1P56278 107 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 P2RX3P56373 397 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 PPP1R8Q12972 351 aaKnown RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GAGE2BQ13066 116 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 CUL3Q13618 768 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 TSTA3Q13630 321 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 DPYSQ14117 519 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 OASLQ15646 514 aaKnown RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GAGE2EQ4V326 116 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 RAET1GQ6H3X3 334 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GAGE2AQ6NT46 116 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 TMEM71Q6P5X7 295 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 AFTPHQ6ULP2 937 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 SLC36A4Q6YBV0 504 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 B3GNT6Q6ZMB0 384 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 ZNF534Q76KX8 674 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 SPATA2LQ8IUW3 424 aaPredicted RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 AQP12AQ8IXF9 295 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 ANKRD13CQ8N6S4 541 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 KIAA0895Q8NCT3 520 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 OR52E1Q8NGJ3 308 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 BICD2Q8TD16 824 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 RNASE8Q8TDE3 154 aaKnown RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 THRSPQ92748 146 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 TAAR8Q969N4 342 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 TMEM186Q96B77 213 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 DTD2Q96FN9 168 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GRAMD2BQ96HH9 432 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 FAM213AQ9BRX8 229 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 HAUS8Q9BT25 410 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 THUMPD2Q9BTF0 503 aaKnown RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 S1PR5Q9H228 398 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 CDH20Q9HBT6 801 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 PNPLA3Q9NST1 481 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 TMEM51Q9NW97 253 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 ANKMY1Q9P2S6 941 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 RHCGQ9UBD6 479 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 EXTL2Q9UBQ6 330 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 TRIM10Q9UDY6 481 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GAGE2DQ9UEU5 116 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 HPCAL4Q9UM19 191 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 CDC14AQ9UNH5 594 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 GPR132Q9UNW8 380 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 EXOC6BQ9Y2D4 811 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 WDR37Q9Y2I8 494 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 SRPRBQ9Y5M8 271 aaKnown RBP4.06□□□□□ -1.76
SCAF11-210ENST00000547654 RICTORQ6R327 1708 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 RAPGEF6Q8TEU7 1601 aa4.06□□□□□ -1.76
SCAF11-210ENST00000547654 UHRF1BP1LA0JNW5 1464 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 FAM205AQ6ZU69 1335 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 C2orf92A0A1B0GVN3 265 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 HEPACAM2A8MVW5 462 aa4.05□□□□□ -1.76
SCAF11-210ENST00000547654 KPNA7A9QM74 516 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms