RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 INTS7Q9NVH2 962 aaKnown RBP14.03□□□□□ -0.16
RTN3-214ENST00000545432 HYKKA2RU49 373 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 ASPDHA6ND91 283 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 GPC4O75487 556 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 FTH1P02794 183 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 MYBL2P10244 700 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 RBL1P28749 1068 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 GRIA3P42263 894 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 LONRF1Q17RB8 773 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 ITPRIPL1Q6GPH6 555 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 HIBCHQ6NVY1 386 aaPredicted RBP14.02□□□□□ -0.17
RTN3-214ENST00000545432 TMEM205Q6UW68 189 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 CEP97Q8IW35 865 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 SLC22A15Q8IZD6 547 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 SIRT6Q8N6T7 355 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 OR2L8Q8NGY9 312 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 SELENOSQ9BQE4 189 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 TGIF2Q9GZN2 237 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 ZNF700Q9H0M5 742 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 TINAGQ9UJW2 476 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 MAU2Q9Y6X3 613 aa14.02□□□□□ -0.17
RTN3-214ENST00000545432 IDSB3KWA1 339 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 WFS1O76024 890 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 SERPINC1P01008 464 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 ESRRAP11474 423 aaPredicted RBP14.01□□□□□ -0.17
RTN3-214ENST00000545432 ICAM2P13598 275 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 EMP2P54851 167 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 AP2B1P63010 937 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 CSNK1G2P78368 415 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 SRSF11Q05519 484 aaKnown RBP14.01□□□□□ -0.17
RTN3-214ENST00000545432 PCOLCEQ15113 449 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 PRTGQ2VWP7 1150 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 ANKRD20A2Q5SQ80 823 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 ANKRD20A1Q5TYW2 823 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 ANKRD20A3Q5VUR7 823 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 KAZNQ674X7 775 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 KCTD11Q693B1 232 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 H3F3CQ6NXT2 135 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 BBS12Q6ZW61 710 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 CHERPQ8IWX8 916 aaKnown RBP14.01□□□□□ -0.17
RTN3-214ENST00000545432 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.01□□□□□ -0.173e-7■■■□□ 19.1
RTN3-214ENST00000545432 HMGCLL1Q8TB92 370 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 CHTF18Q8WVB6 975 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 MVB12AQ96EY5 273 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 GPR137Q96N19 417 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 DMRTA2Q96SC8 542 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 GPAMQ9HCL2 828 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 RIC8BQ9NVN3 520 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 SMARCAL1Q9NZC9 954 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 TNFRSF10DQ9UBN6 386 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 SH3BGRL2Q9UJC5 107 aa14.01□□□□□ -0.17
RTN3-214ENST00000545432 CPAMD8Q8IZJ3 1885 aa14□□□□□ -0.17
RTN3-214ENST00000545432 APOC4-APOC2K7ER74 178 aa14□□□□□ -0.17
RTN3-214ENST00000545432 ADAM10O14672 748 aa14□□□□□ -0.17
RTN3-214ENST00000545432 PSTPIP1O43586 416 aa14□□□□□ -0.17
RTN3-214ENST00000545432 APOC2P02655 101 aa14□□□□□ -0.17
RTN3-214ENST00000545432 CELA2AP08217 269 aa14□□□□□ -0.17
RTN3-214ENST00000545432 ITGAMP11215 1152 aa14□□□□□ -0.17
RTN3-214ENST00000545432 COMTP21964 271 aa14□□□□□ -0.17
RTN3-214ENST00000545432 CXCR2P25025 360 aa14□□□□□ -0.17
RTN3-214ENST00000545432 PSMB4P28070 264 aa14□□□□□ -0.17
RTN3-214ENST00000545432 VSX2P58304 361 aaPredicted RBP14□□□□□ -0.17
RTN3-214ENST00000545432 ODF2Q5BJF6 829 aa14□□□□□ -0.17
RTN3-214ENST00000545432 FRMPD2BQ6IN97 320 aa14□□□□□ -0.17
RTN3-214ENST00000545432 CNSTQ6PJW8 725 aa14□□□□□ -0.17
RTN3-214ENST00000545432 RNF44Q7L0R7 432 aa14□□□□□ -0.17
RTN3-214ENST00000545432 TAS2R42Q7RTR8 314 aa14□□□□□ -0.17
RTN3-214ENST00000545432 SIAH3Q8IW03 269 aa14□□□□□ -0.17
RTN3-214ENST00000545432 ARHGEF39Q8N4T4 335 aa14□□□□□ -0.17
RTN3-214ENST00000545432 METTL27Q8N6F8 245 aaPredicted RBP14□□□□□ -0.17
RTN3-214ENST00000545432 SUN3Q8TAQ9 357 aa14□□□□□ -0.17
RTN3-214ENST00000545432 STYXQ8WUJ0 223 aa14□□□□□ -0.17
RTN3-214ENST00000545432 C10orf90Q96M02 699 aa14□□□□□ -0.17
RTN3-214ENST00000545432 C14orf105Q9NVL8 296 aa14□□□□□ -0.17
RTN3-214ENST00000545432 STMN3Q9NZ72 180 aa14□□□□□ -0.17
RTN3-214ENST00000545432 NEU2Q9Y3R4 380 aa14□□□□□ -0.17
RTN3-214ENST00000545432 NIPBLQ6KC79 2804 aaeCLIP14□□□□□ -0.17
RTN3-214ENST00000545432 ACANP16112 2415 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 LOC105369274A0A096LPK9 316 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 LOC102723532A0A0G2JNH3 316 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 MROH6A6NGR9 719 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 E9PLN8 166 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 RASGRF2O14827 1237 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 F10P00742 488 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 CCR7P32248 378 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 FOXN2P32314 431 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 SLC26A3P40879 764 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 HADHBP55084 474 aaKnown RBP13.99□□□□□ -0.17
RTN3-214ENST00000545432 DSG2Q14126 1118 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 BRD3Q15059 726 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 SF1Q15637 639 aaKnown RBP13.99□□□□□ -0.17
RTN3-214ENST00000545432 MUM1Q2TAK8 710 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 ABHD17BQ5VST6 288 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 FAAH2Q6GMR7 532 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 FBXO42Q6P3S6 717 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 UNC5DQ6UXZ4 953 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 NAPRTQ6XQN6 538 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 VRK3Q8IV63 474 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 DCUN1D3Q8IWE4 304 aa13.99□□□□□ -0.17
RTN3-214ENST00000545432 KATNAL2Q8IYT4 538 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms