RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SYBUQ9NX95 663 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.57■□□□□ 0.08
DDX55-212ENST00000544738 C5AR2Q9P296 337 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 GPN3Q9UHW5 284 aaPredicted RBP15.57■□□□□ 0.08
DDX55-212ENST00000544738 SOX13Q9UN79 622 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 SEC16AO15027 2179 aa15.57■□□□□ 0.08
DDX55-212ENST00000544738 RASGRF2O14827 1237 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 PAMP19021 973 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 MAGP20916 626 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 CCNFP41002 786 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 MAGEA6P43360 314 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 ADARP55265 1226 aaKnown RBP15.56■□□□□ 0.08
DDX55-212ENST00000544738 EIF3BP55884 814 aaKnown RBP15.56■□□□□ 0.08
DDX55-212ENST00000544738 GRB7Q14451 532 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 SSPNQ14714 243 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 ZC3H12BQ5HYM0 836 aaKnown RBP15.56■□□□□ 0.08
DDX55-212ENST00000544738 VWA5B1Q5TIE3 1220 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 MLIPQ5VWP3 458 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 ZNF655Q8N720 491 aaPredicted RBP15.56■□□□□ 0.08
DDX55-212ENST00000544738 LINC01555Q8NAE3 123 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 ST6GALNAC3Q8NDV1 305 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 MAGEC3Q8TD91 643 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 SKA2Q8WVK7 121 aaPredicted RBP15.56■□□□□ 0.08
DDX55-212ENST00000544738 DLG3Q92796 817 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 PBKQ96KB5 322 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 LURAP1Q96LR2 239 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 GBP5Q96PP8 586 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 NAP1L3Q99457 506 aaPredicted RBP15.56■□□□□ 0.08
DDX55-212ENST00000544738 MENTQ9BUN1 341 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 AGPAT4Q9NRZ5 378 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 EURLQ9NYK6 297 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 SAMD15Q9P1V8 674 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 TTC7AQ9ULT0 858 aaPredicted RBP15.56■□□□□ 0.08
DDX55-212ENST00000544738 VPS9D1Q9Y2B5 631 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 NTNG1Q9Y2I2 539 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 JRKLQ9Y4A0 524 aa15.56■□□□□ 0.08
DDX55-212ENST00000544738 PCNX1Q96RV3 2341 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 MAGEB16A2A368 324 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 HCRTR1O43613 425 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 KLF7O75840 302 aaPredicted RBP15.55■□□□□ 0.08
DDX55-212ENST00000544738 IGHEP01854 428 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 ESR1P03372 595 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 CBSLP0DN79 551 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 ARNTP27540 789 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 CBSP35520 551 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 ARSFP54793 590 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 GPS1Q13098 491 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 KCNJ11Q14654 390 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 SF1Q15637 639 aaKnown RBP15.55■□□□□ 0.08
DDX55-212ENST00000544738 TRIP13Q15645 432 aaPredicted RBP15.55■□□□□ 0.08
DDX55-212ENST00000544738 TYSND1Q2T9J0 566 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 KIAA0930Q6ICG6 404 aaPredicted RBP15.55■□□□□ 0.08
DDX55-212ENST00000544738 MCATQ8IVS2 390 aaKnown RBP15.55■□□□□ 0.08
DDX55-212ENST00000544738 RASGEF1CQ8N431 466 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 ZBTB2Q8N680 514 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 ZUFSPQ96AP4 578 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 BIRC8Q96P09 236 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 IFT80Q9P2H3 777 aaPredicted RBP15.55■□□□□ 0.08
DDX55-212ENST00000544738 COPG2Q9UBF2 871 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 DHCR7Q9UBM7 475 aaKnown RBP15.55■□□□□ 0.08
DDX55-212ENST00000544738 NDOR1Q9UHB4 597 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 SVILO95425 2214 aa15.55■□□□□ 0.08
DDX55-212ENST00000544738 TCRBV7S3A2A0A539 114 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 TARM1B6A8C7 271 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 DIAPH2O60879 1101 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 C1orf105O95561 183 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 KRT14P02533 472 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 SNRPB2P08579 225 aaKnown RBP15.54■□□□□ 0.08
DDX55-212ENST00000544738 PIM1P11309 404 aaPredicted RBP15.54■□□□□ 0.08
DDX55-212ENST00000544738 MLNP12872 115 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 OGNP20774 298 aaKnown RBP15.54■□□□□ 0.08
DDX55-212ENST00000544738 ATP5DP30049 168 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 FMO4P31512 558 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 FOLR3P41439 243 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 VPS41P49754 854 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 ATP1A4Q13733 1029 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 NKAIN1Q4KMZ8 207 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 CRB2Q5IJ48 1285 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 TCTE1Q5JU00 501 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 C1orf189Q5VU69 101 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 CASC4Q6P4E1 433 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 CES3Q6UWW8 571 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 C2orf73Q8N5S3 287 aaPredicted RBP15.54■□□□□ 0.08
DDX55-212ENST00000544738 OR2Y1Q8NGV0 311 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 HMGCLL1Q8TB92 370 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 LPGAT1Q92604 370 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 MAGOHBQ96A72 148 aaKnown RBP15.54■□□□□ 0.08
DDX55-212ENST00000544738 IL17FQ96PD4 163 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 BARD1Q99728 777 aaKnown RBP15.54■□□□□ 0.08
DDX55-212ENST00000544738 CIDEBQ9UHD4 219 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 NIPBLQ6KC79 2804 aaeCLIP15.54■□□□□ 0.08
DDX55-212ENST00000544738 PKDREJQ9NTG1 2253 aa15.54■□□□□ 0.08
DDX55-212ENST00000544738 SDR42E2A6NKP2 422 aa15.53■□□□□ 0.08
DDX55-212ENST00000544738 PRICKLE3O43900 615 aaPredicted RBP15.53■□□□□ 0.08
DDX55-212ENST00000544738 KLHL41O60662 606 aa15.53■□□□□ 0.08
DDX55-212ENST00000544738 AVILO75366 819 aa15.53■□□□□ 0.08
DDX55-212ENST00000544738 CHRM3P20309 590 aa15.53■□□□□ 0.08
DDX55-212ENST00000544738 ALAS2P22557 587 aa15.53■□□□□ 0.08
DDX55-212ENST00000544738 ITGA3P26006 1051 aa15.53■□□□□ 0.08
DDX55-212ENST00000544738 CTSL3PQ5NE16 218 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms