RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 FIBINQ8TAL6 211 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 RNF128Q8TEB7 428 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 GRK7Q8WTQ7 553 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 SSMEM1Q8WWF3 244 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 FIG4Q92562 907 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 PTP4A1Q93096 173 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 CDCA5Q96FF9 252 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 GTPBP2Q9BX10 602 aaKnown RBP3.52□□□□□ -1.85
SCFD1-207ENST00000544052 C1QTNF7Q9BXJ2 289 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 DNAJC4Q9NNZ3 241 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 PTTG2Q9NZH5 202 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 B3GAT1Q9P2W7 334 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 ARMCX3Q9UH62 379 aaPredicted RBP3.52□□□□□ -1.85
SCFD1-207ENST00000544052 VDAC3Q9Y277 283 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 TNFRSF18Q9Y5U5 241 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 PKD1L3Q7Z443 1732 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 BCL9O00512 1426 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 TNS2Q63HR2 1409 aa3.52□□□□□ -1.85
SCFD1-207ENST00000544052 NEMP2A6NFY4 417 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 WDPCPO95876 746 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 IGHV2-70P01814 119 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 TFAP2AP05549 437 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 CDH1P12830 882 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 CKMT2P17540 419 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 CASTP20810 708 aaKnown RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SCP2P22307 547 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 EEF1B2P24534 225 aaKnown RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 NAGLUP54802 743 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 DMPKQ09013 629 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 TRAF2Q12933 501 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ITGA7Q13683 1181 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PHLDA2Q53GA4 152 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SYT14P1Q58G82 188 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SFMBT2Q5VUG0 894 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SHEQ5VZ18 495 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PRR27Q6MZM9 219 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 C11orf88Q6PI97 169 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 GBP6Q6ZN66 633 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 COMMD2Q86X83 199 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 TUSC5Q8IXB3 177 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SYCP3Q8IZU3 236 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 MSANTD4Q8NCY6 345 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 OR13J1Q8NGT2 312 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 LILRB1Q8NHL6 650 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 MGARPQ8TDB4 240 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 AFAP1L1Q8TED9 768 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 MOB3AQ96BX8 217 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 LINGO1Q96FE5 620 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SPATA33Q96N06 139 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 TESK2Q96S53 571 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 BTBD10Q9BSF8 475 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 FUT8Q9BYC5 575 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SEZ6LQ9BYH1 1024 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PELI2Q9HAT8 420 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 MTRRQ9UBK8 725 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SNX7Q9UNH6 387 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 IGSF1Q8N6C5 1336 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 KTN1Q86UP2 1357 aaKnown RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PARD3Q8TEW0 1356 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 A0A087WV48 116 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 A0A1W2PPK0 400 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 TRIM64A6NGJ6 449 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 TRIM64BA6NI03 449 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 C4orf47A7E2U8 309 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 HNRNPCL2B2RXH8 293 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ST8SIA3O43173 380 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ZBTB11O95625 1053 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 VIMP08670 466 aaKnown RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 FCGR1AP12314 374 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ATP6V1B1P15313 513 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 GNAZP19086 355 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 JAK1P23458 1154 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ACAT1P24752 427 aaKnown RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 WNT5AP41221 380 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 LINC00205P59089 165 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PRKCZQ05513 592 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ZNF415Q09FC8 603 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ZBTB17Q13105 803 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 TYSND1Q2T9J0 566 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ZNF517Q6ZMY9 492 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PLEKHM3Q6ZWE6 761 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PIWIL4Q7Z3Z4 852 aaKnown RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 HOOK3Q86VS8 718 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 KMT5CQ86Y97 462 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ZNF611Q8N823 705 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 L3MBTL4Q8NA19 623 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 VOPP1Q96AW1 172 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PHF21BQ96EK2 531 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ERO1AQ96HE7 468 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 ADGRG7Q96K78 797 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 NTPCRQ9BSD7 190 aaKnown RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 INPP5KQ9BT40 448 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 DNAI2Q9GZS0 605 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 FN3KQ9H479 309 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 SERINC1Q9NRX5 453 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 C5P01031 1676 aa3.51□□□□□ -1.85
SCFD1-207ENST00000544052 TRIP12Q14669 1992 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-207ENST00000544052 PCDH11YQ9BZA8 1340 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms