RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 NXNL1Q96CM4 212 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 OR6C1Q96RD1 312 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 TAAR9Q96RI9 348 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 CCDC77Q9BR77 488 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 ATG10Q9H0Y0 220 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 VPS11Q9H270 941 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 CCDC86Q9H6F5 360 aaKnown RBP14.54□□□□□ -0.08
CD9-210ENST00000543916 FAM60AQ9NP50 221 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 FBXO8Q9NRD0 319 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 ABCF3Q9NUQ8 709 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 FOXJ2Q9P0K8 574 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 PSMC3IPQ9P2W1 217 aaPredicted RBP14.54□□□□□ -0.08
CD9-210ENST00000543916 DKK4Q9UBT3 224 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 TAC3Q9UHF0 121 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 TLK1Q9UKI8 766 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 PCDHB11Q9Y5F2 797 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 PCM1Q15154 2024 aa14.54□□□□□ -0.08
CD9-210ENST00000543916 FREM2Q5SZK8 3169 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 PABPN1LA6NDY0 278 aaKnown RBP14.53□□□□□ -0.08
CD9-210ENST00000543916 RFPL1O75677 317 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 SLC5A2P31639 672 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 GRIA3P42263 894 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 KCNC1P48547 511 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 CDKL1Q00532 357 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 TUBB3Q13509 450 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 NAE1Q13564 534 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 TBC1D25Q3MII6 688 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 FCRL6Q6DN72 434 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 CDHR3Q6ZTQ4 885 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 FRA10AC1Q70Z53 315 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 CCDC91Q7Z6B0 441 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 PLD6Q8N2A8 252 aaKnown RBP14.53□□□□□ -0.08
CD9-210ENST00000543916 EPS8L3Q8TE67 593 aaKnown RBP14.53□□□□□ -0.08
CD9-210ENST00000543916 MZB1Q8WU39 189 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 MED8Q96G25 268 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 DDA1Q9BW61 102 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 ALG9Q9H6U8 611 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 NMRAL1Q9HBL8 299 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 PDE7BQ9NP56 450 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 SLC6A20Q9NP91 592 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 CCDC177Q9NQR7 707 aaPredicted RBP14.53□□□□□ -0.08
CD9-210ENST00000543916 THSD1Q9NS62 852 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 FGF21Q9NSA1 209 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 TBK1Q9UHD2 729 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 PCDHGA7Q9Y5G6 932 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 B3GALT1Q9Y5Z6 326 aa14.53□□□□□ -0.08
CD9-210ENST00000543916 IGKV1-8A0A0C4DH67 115 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 SMIM23A6NLE4 172 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 POLR1CO15160 346 aaPredicted RBP14.52□□□□□ -0.09
CD9-210ENST00000543916 NVLO15381 856 aaKnown RBP14.52□□□□□ -0.09
CD9-210ENST00000543916 HCRTR1O43613 425 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 TLX3O43711 291 aaPredicted RBP14.52□□□□□ -0.09
CD9-210ENST00000543916 NRP2O60462 931 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 KLHL2O95198 593 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 FKBP9O95302 570 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 TUBBP07437 444 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 NUDT17P0C025 328 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 CMPK1P30085 196 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 SLCO1A2P46721 670 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 GLRBP48167 497 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 GABRA4P48169 554 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 RAB15P59190 212 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ERVPABLB-1P60509 514 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 TGFBIQ15582 683 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 DEFB110Q30KQ9 67 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 C18orf21Q32NC0 220 aaPredicted RBP14.52□□□□□ -0.09
CD9-210ENST00000543916 TMTC4Q5T4D3 741 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 DCAF12Q5T6F0 453 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 LGSNQ5TDP6 509 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ICE2Q659A1 982 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 FIGLAQ6QHK4 219 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ISCA2Q86U28 154 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 TDRPQ86YL5 185 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 GPSM1Q86YR5 675 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 MREGQ8N565 214 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 OR56A3Q8NH54 315 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ATL1Q8WXF7 558 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ALKBH8Q96BT7 664 aaKnown RBP14.52□□□□□ -0.09
CD9-210ENST00000543916 PYCR2Q96C36 320 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ZNF501Q96CX3 271 aaPredicted RBP14.52□□□□□ -0.09
CD9-210ENST00000543916 MTBPQ96DY7 904 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 RNF31Q96EP0 1072 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 TCTN2Q96GX1 697 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ZNF578Q96N58 590 aaPredicted RBP14.52□□□□□ -0.09
CD9-210ENST00000543916 GPR78Q96P69 363 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ATOH8Q96SQ7 321 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 EGFL8Q99944 293 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 SGPP1Q9BX95 441 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 ZNF358Q9NW07 568 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 EURLQ9NYK6 297 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 RNF112Q9ULX5 631 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 SH2B3Q9UQQ2 575 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 PCDHGA3Q9Y5H0 932 aa14.52□□□□□ -0.09
CD9-210ENST00000543916 IQANK1A0A1B0GTG1 560 aa14.51□□□□□ -0.09
CD9-210ENST00000543916 NCF1BA6NI72 391 aaPredicted RBP14.51□□□□□ -0.09
CD9-210ENST00000543916 NCF1CA8MVU1 366 aaPredicted RBP14.51□□□□□ -0.09
CD9-210ENST00000543916 FOXO6A8MYZ6 492 aa14.51□□□□□ -0.09
CD9-210ENST00000543916 TIAF1O95411 115 aa14.51□□□□□ -0.09
CD9-210ENST00000543916 ANXA5P08758 320 aa14.51□□□□□ -0.09
CD9-210ENST00000543916 FGF5P12034 268 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms