RNA–Protein interactions for RNA: ENST00000543888.1

C2CD5-217, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 4

Gene C2CD5, Length 572 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-217ENST00000543888 METTL27Q8N6F8 245 aaPredicted RBP3.87□□□□□ -1.79
C2CD5-217ENST00000543888 SPATA20Q8TB22 786 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 SCARB1Q8WTV0 552 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 UBLCP1Q8WVY7 318 aaPredicted RBP3.87□□□□□ -1.79
C2CD5-217ENST00000543888 VOPP1Q96AW1 172 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 NSL1Q96IY1 281 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 THOC3Q96J01 351 aaKnown RBP3.87□□□□□ -1.79
C2CD5-217ENST00000543888 KLHL5Q96PQ7 755 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 ACAT2Q9BWD1 397 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 CACNG6Q9BXT2 260 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 LSG1Q9H089 658 aaKnown RBP3.87□□□□□ -1.79
C2CD5-217ENST00000543888 EVA1AQ9H8M9 152 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 Q9H8V8 135 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 RAB9BQ9NP90 201 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 ZNF701Q9NV72 531 aaPredicted RBP3.87□□□□□ -1.79
C2CD5-217ENST00000543888 DNAJC17Q9NVM6 304 aaKnown RBP3.87□□□□□ -1.79
C2CD5-217ENST00000543888 TMEM161AQ9NX61 479 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 ZDHHC2Q9UIJ5 367 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 TRIM17Q9Y577 477 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 PCDHGB1Q9Y5G3 927 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 ACEP12821 1306 aa3.87□□□□□ -1.79
C2CD5-217ENST00000543888 A0A1W2PS18 150 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 SMIM30A4D0T7 59 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 KBTBD13C9JR72 458 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 DDX39AO00148 427 aaKnown RBP3.86□□□□□ -1.79
C2CD5-217ENST00000543888 ARPC2O15144 300 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 CTDSPLO15194 276 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 KINO60870 393 aaKnown RBP3.86□□□□□ -1.79
C2CD5-217ENST00000543888 PPP1R3DO95685 299 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 GH1P01241 217 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 C9P02748 559 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 ANKRD34CP0C6C1 535 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 SNHG28P0DPA3 235 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 UROSP10746 265 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 PLA2G2AP14555 144 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 HLA-DPA1P20036 260 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 CDH3P22223 829 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 CD27P26842 260 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 ZXDBP98169 803 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 ACTN3Q08043 901 aaPredicted RBP3.86□□□□□ -1.79
C2CD5-217ENST00000543888 PHKG1Q16816 387 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 IQCCQ4KMZ1 466 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 DCAF10Q5QP82 559 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 PRSS57Q6UWY2 283 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.86□□□□□ -1.79
C2CD5-217ENST00000543888 KCTD9Q7L273 389 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 RTN4RL2Q86UN3 420 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 EID3Q8N140 333 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 NDUFAF2Q8N183 169 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 LMNTD1Q8N9Z9 388 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 NOA1Q8NC60 698 aaKnown RBP3.86□□□□□ -1.79
C2CD5-217ENST00000543888 OR13A1Q8NGR1 328 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 NCOA7Q8NI08 942 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 GRHL3Q8TE85 626 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 HSD17B8Q92506 261 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 ZBTB9Q96C00 473 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 PYCR2Q96C36 320 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 SGF29Q96ES7 293 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 PGM2Q96G03 612 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 LYZL4Q96KX0 146 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 AK8Q96MA6 479 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 PSD2Q9BQI7 771 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 HIPK2Q9H2X6 1198 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 DDX31Q9H8H2 851 aaKnown RBP3.86□□□□□ -1.79
C2CD5-217ENST00000543888 ZBTB20Q9HC78 741 aaPredicted RBP3.86□□□□□ -1.79
C2CD5-217ENST00000543888 CD93Q9NPY3 652 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 IARS2Q9NSE4 1012 aaKnown RBP3.86□□□□□ -1.79
C2CD5-217ENST00000543888 ECHDC1Q9NTX5 307 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 FBXL5Q9UKA1 691 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 KNSTRNQ9Y448 316 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 RPGRIP1LQ68CZ1 1315 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 HEG1Q9ULI3 1381 aa3.86□□□□□ -1.79
C2CD5-217ENST00000543888 SDR42E2A6NKP2 422 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 KERAO60938 352 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 PRKRAO75569 313 aaKnown RBP3.85□□□□□ -1.79
C2CD5-217ENST00000543888 PIGNO95427 931 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 SLC16A8O95907 504 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 SNRNP70P08621 437 aaKnown RBP3.85□□□□□ -1.79
C2CD5-217ENST00000543888 HMOX1P09601 288 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 THEGLP0DJG4 465 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 CETPP11597 493 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 DGKAP23743 735 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 CTNNB1P35222 781 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 FRKP42685 505 aaPredicted RBP3.85□□□□□ -1.79
C2CD5-217ENST00000543888 RPL21P46778 160 aaKnown RBP3.85□□□□□ -1.79
C2CD5-217ENST00000543888 CDX1P47902 265 aaPredicted RBP3.85□□□□□ -1.79
C2CD5-217ENST00000543888 NPBWR1P48145 328 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 VAMP7P51809 220 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 NME5P56597 212 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 CLDN15P56746 228 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 NANOS2P60321 138 aaKnown RBP3.85□□□□□ -1.79
C2CD5-217ENST00000543888 KLC1Q07866 573 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 LGALS3BPQ08380 585 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 RASGEF1BQ0VAM2 473 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 TAF10Q12962 218 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 SLC39A12Q504Y0 691 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.85□□□□□ -1.79
C2CD5-217ENST00000543888 OR4A47Q6IF82 309 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 BTNL8Q6UX41 500 aa3.85□□□□□ -1.79
C2CD5-217ENST00000543888 NHLRC1Q6VVB1 395 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms