RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 SLC5A12Q1EHB4 618 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 SLC39A12Q504Y0 691 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 SSX6Q7RTT6 188 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 THOC6Q86W42 341 aaKnown RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 TMEM17Q86X19 198 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PDSS2Q86YH6 399 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CTAGE3PQ8IX95 158 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 RBFAQ8N0V3 343 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 ARMC10Q8N2F6 343 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 POC5Q8NA72 575 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 SETD9Q8NE22 299 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 OR10H5Q8NGA6 315 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 LKAAEAR1Q8TD35 194 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 ATOH1Q92858 354 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PHF21BQ96EK2 531 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PUS7LQ9H0K6 701 aaKnown RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 SLCO5A1Q9H2Y9 848 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 LRRC40Q9H9A6 602 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PRDM8Q9NQV8 689 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 HIF1ANQ9NWT6 349 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 NKIRAS1Q9NYS0 192 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 TAS2R1Q9NYW7 299 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 MARK1Q9P0L2 795 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 KANSL3Q9P2N6 904 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CTSFQ9UBX1 484 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PLLPQ9Y342 182 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 A0A087WV62 115 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF729A6NN14 1252 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 AGRPO00253 132 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 STX11O75558 287 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 LYPLA1O75608 230 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CBX6O95503 412 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PRF1P14222 555 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 RAB3BP20337 219 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 HNRNPA2B1P22626 353 aaKnown RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PIK3R1P27986 724 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 KIR3DL2P43630 455 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 TEKQ02763 1124 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CLCQ05315 142 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 MPPED2Q15777 294 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 HSD17B12Q53GQ0 312 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 FASTKD1Q53R41 847 aaKnown RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 ZNF468Q5VIY5 522 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 DCAF12L1Q5VU92 463 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 KRT80Q6KB66 452 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 RASSF6Q6ZTQ3 369 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 OLIG1Q8TAK6 271 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 NEK7Q8TDX7 302 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CYGBQ8WWM9 190 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CPNE4Q96A23 557 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 LRRC37BQ96QE4 947 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 MED18Q9BUE0 208 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 ACE2Q9BYF1 805 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 C14orf105Q9NVL8 296 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 IGSF9Q9P2J2 1179 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 UPB1Q9UBR1 384 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 ACTL7BQ9Y614 415 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 A0A087X0T9 212 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 SLC30A4O14863 429 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 TNFAIP8O95379 198 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CD48P09326 243 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 MBL2P11226 248 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 NQO2P16083 231 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 MPSTP25325 297 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 MAP4K2Q12851 820 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 DLG1Q12959 904 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 BNIP2Q12982 314 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 NBPF12Q5TAG4 269 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 DARS2Q6PI48 645 aaKnown RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PRPF39Q86UA1 669 aaKnown RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 NT5DC3Q86UY8 548 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 IGFN1Q86VF2 1251 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CPNE9Q8IYJ1 553 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 FBXO25Q8TCJ0 367 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 RASGRP4Q8TDF6 673 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 DNAJB3Q8WWF6 145 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 KLHL6Q8WZ60 621 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 AMDHD1Q96NU7 426 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 BIRC8Q96P09 236 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 SEMA6BQ9H3T3 888 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 FAM96AQ9H5X1 160 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 FZD3Q9NPG1 666 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 PAK6Q9NQU5 681 aaPredicted RBP8.69□□□□□ -1.02
VPS13D-212ENST00000543766 COA4Q9NYJ1 87 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 RDH8Q9NYR8 311 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 NCKAP1Q9Y2A7 1128 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 FKBP7Q9Y680 259 aa8.69□□□□□ -1.02
VPS13D-212ENST00000543766 CBX4O00257 560 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 DENRO43583 198 aaKnown RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 NSA2O95478 260 aaKnown RBP8.68□□□□□ -1.02
VPS13D-212ENST00000543766 UQCRBP14927 111 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 CD1EP15812 388 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 RHOQP17081 205 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 RHCEP18577 417 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 RFC2P35250 354 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 GGT5P36269 586 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 ACTR1BP42025 376 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 DGKEP52429 567 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 SLC18A1P54219 525 aa8.68□□□□□ -1.02
VPS13D-212ENST00000543766 NHLH1Q02575 133 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms