RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SCUBE1Q8IWY4 988 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 ULK2Q8IYT8 1036 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 FNDC5Q8NAU1 212 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 FLCNQ8NFG4 579 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 TSPEARQ8WU66 669 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 WDR34Q96EX3 536 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 SHDQ96IW2 340 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 MYOCQ99972 504 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 TRIT1Q9H3H1 467 aaKnown RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 ELOVL6Q9H5J4 265 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 LTB4R2Q9NPC1 389 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 GALNT8Q9NY28 637 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 CCDC167Q9P0B6 97 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 PRPF19Q9UMS4 504 aaKnown RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 PRSS38A1L453 326 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 POM121BA6NF01 834 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 A8MUI8 341 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 AIM2O14862 343 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 RSL1D1O76021 490 aaKnown RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 PDYNP01213 254 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 DIO3P55073 304 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 IRF8Q02556 426 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 FZD5Q13467 585 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 RPS6KA2Q15349 733 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 CPSF6Q16630 551 aaKnown RBP eCLIP9.04□□□□□ -0.96
GNE-206ENST00000543356 COQ5Q5HYK3 327 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 KIAA0895LQ68EN5 471 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 REP15Q6BDI9 236 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 HACD2Q6Y1H2 254 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 SYTL1Q8IYJ3 562 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 TBC1D21Q8IYX1 336 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 PGAM4Q8N0Y7 254 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 PGBD3Q8N328 593 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 PPFIBP2Q8ND30 876 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 OR5AR1Q8NGP9 310 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 OR9I1Q8NGQ6 314 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 WDR92Q96MX6 357 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 OR2M4Q96R27 311 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 THTPAQ9BU02 230 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 MRPL1Q9BYD6 325 aaKnown RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 FGF22Q9HCT0 170 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 CCDC177Q9NQR7 707 aaPredicted RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 FARSBQ9NSD9 589 aaKnown RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 NOP53Q9NZM5 478 aaKnown RBP9.04□□□□□ -0.96
GNE-206ENST00000543356 HS3ST3A1Q9Y663 406 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 KCNE2Q9Y6J6 123 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 TRIOBPQ9H2D6 2365 aa9.04□□□□□ -0.96
GNE-206ENST00000543356 LRP4O75096 1905 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 A0A088AWK7 358 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 KRBA1A5PL33 1030 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 TMEM221A6NGB7 291 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 ZNF839A8K0R7 811 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 E7ENX8 843 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 H0YIV9 168 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 TNFRSF10CO14798 259 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 GNAZP19086 355 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 NUDT1P36639 197 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 GNPDA1P46926 289 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 CLCNKAP51800 687 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 CLDN2P57739 230 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 CTBSQ01459 385 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 TAP2Q03519 686 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 ZP2Q05996 745 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 CSTF3Q12996 717 aaKnown RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 DOC2AQ14183 400 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 CYP2A13Q16696 494 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 IMPG1Q17R60 797 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 AP5B1Q2VPB7 878 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 XKR6Q5GH73 641 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 FRG2Q64ET8 278 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 ZFAND4Q86XD8 727 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 DEFB107AQ8IZN7 70 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 DSELQ8IZU8 1212 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 DEFB123Q8N688 67 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 TMEM145Q8NBT3 493 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 TSTD1Q8NFU3 115 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 SETD7Q8WTS6 366 aaKnown RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 SELENOMQ8WWX9 145 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 BMFQ96LC9 184 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 FRG2BQ96QU4 278 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 HBEGFQ99075 208 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 C1orf50Q9BV19 199 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 ACPTQ9BZG2 426 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 EHD1Q9H4M9 534 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 MRPL40Q9NQ50 206 aaKnown RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 CIDEBQ9UHD4 219 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 PSMD13Q9UNM6 376 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 DMTF1Q9Y222 760 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 DYRK1BQ9Y463 629 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 DOCK9Q9BZ29 2069 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 MYO10Q9HD67 2058 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 FBP2O00757 339 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 PI15O43692 258 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 NRP2O60462 931 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 IGHV4-34P06331 123 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 ACPPP15309 386 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 PCSK2P16519 638 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 CD22P20273 847 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 IDSP22304 550 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 HTR1BP28222 390 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms