RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 GOLGA6L1Q8N7Z2 621 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 AGBL5Q8NDL9 886 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 RDH11Q8TC12 318 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 UBTD2Q8WUN7 234 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 JPH3Q8WXH2 748 aaPredicted RBP11.76□□□□□ -0.53
DDX55-210ENST00000543016 KLHL6Q8WZ60 621 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 CCDC126Q96EE4 140 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 APOPT1Q96IL0 206 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 TGM7Q96PF1 710 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 OR2A14Q96R47 310 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 CMKLR1Q99788 373 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 SEMA6CQ9H3T2 930 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 ZNF768Q9H5H4 540 aaKnown RBP11.76□□□□□ -0.53
DDX55-210ENST00000543016 XPR1Q9UBH6 696 aa11.76□□□□□ -0.53
DDX55-210ENST00000543016 PTBP2Q9UKA9 531 aaKnown RBP11.76□□□□□ -0.53
DDX55-210ENST00000543016 A0A1W2PPV9 198 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 SUPT3HB4E1H0 165 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 STX16-NPEPL1H3BU86 382 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 STX16O14662 325 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 ATP8B1O43520 1251 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 CSO75390 466 aaKnown RBP11.75□□□□□ -0.53
DDX55-210ENST00000543016 SUPT3HO75486 399 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 STK16O75716 305 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 RASSF9O75901 435 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 MSL3P1P0C860 447 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 MTHFD2P13995 350 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 GFAPP14136 432 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 CSTF2P33240 577 aaKnown RBP eCLIP11.75□□□□□ -0.53
DDX55-210ENST00000543016 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
DDX55-210ENST00000543016 SLC6A12P48065 614 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 KCNC1P48547 511 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 PIK3CGP48736 1102 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 ARL4DP49703 201 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 TBPL1P62380 186 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 HSD11B2P80365 405 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 TMTC4Q5T4D3 741 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 PHF19Q5T6S3 580 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 THEMIS2Q5TEJ8 643 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 PRAMEF13Q5VWM6 474 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 LRRC70Q7Z2Q7 622 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 BPHLQ86WA6 291 aaPredicted RBP11.75□□□□□ -0.53
DDX55-210ENST00000543016 SLC22A9Q8IVM8 553 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 SPNS2Q8IVW8 549 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 FBXO39Q8N4B4 442 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 BANPQ8N9N5 519 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 OR2L3Q8NG85 312 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 OR2A1Q8NGT9 310 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 FLVCR1-AS1Q8TAF5 88 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 TCTN2Q96GX1 697 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 SLC41A2Q96JW4 573 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 CCDC74BQ96LY2 380 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 MAP3K3Q99759 626 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 UNKQ9C0B0 810 aaKnown RBP11.75□□□□□ -0.53
DDX55-210ENST00000543016 CENPHQ9H3R5 247 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 TMBIM4Q9HC24 238 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 SPHK1Q9NYA1 384 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 WWOXQ9NZC7 414 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 GPRC5BQ9NZH0 403 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 TMEM216Q9P0N5 145 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 CIDEBQ9UHD4 219 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 SNX7Q9UNH6 387 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 BTRCQ9Y297 605 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 KCNE2Q9Y6J6 123 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 DNAH14Q0VDD8 3507 aa11.75□□□□□ -0.53
DDX55-210ENST00000543016 CCDC187A0A096LP49 1063 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 UBXN8O00124 270 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 NELFEP18615 380 aaKnown RBP11.74□□□□□ -0.53
DDX55-210ENST00000543016 ATP5F1P24539 256 aaPredicted RBP11.74□□□□□ -0.53
DDX55-210ENST00000543016 PEBP1P30086 187 aaKnown RBP11.74□□□□□ -0.53
DDX55-210ENST00000543016 GFERP55789 205 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 NFKB2Q00653 900 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 FASTKQ14296 549 aaKnown RBP11.74□□□□□ -0.53
DDX55-210ENST00000543016 SETDB1Q15047 1291 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 PCBP2Q15366 365 aaKnown RBP eCLIP11.74□□□□□ -0.53
DDX55-210ENST00000543016 PTCHD3Q3KNS1 767 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 N4BP2L1Q5TBK1 243 aaPredicted RBP11.74□□□□□ -0.53
DDX55-210ENST00000543016 AGBL2Q5U5Z8 902 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 ICE2Q659A1 982 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 MBOAT1Q6ZNC8 495 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 FAM92BQ6ZTR7 304 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 C17orf64Q86WR6 236 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 C4orf33Q8N1A6 199 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 TMEM151AQ8N4L1 468 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 WDR36Q8NI36 951 aaKnown RBP11.74□□□□□ -0.53
DDX55-210ENST00000543016 MED8Q96G25 268 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 TRAPPC9Q96Q05 1148 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 CD244Q9BZW8 370 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 B3GNT4Q9C0J1 378 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 ATG10Q9H0Y0 220 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 PDE7BQ9NP56 450 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 MRPS30Q9NP92 439 aaKnown RBP11.74□□□□□ -0.53
DDX55-210ENST00000543016 TMEM184CQ9NVA4 438 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 ZNF358Q9NW07 568 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 PLLPQ9Y342 182 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 SPTBN4Q9H254 2564 aa11.74□□□□□ -0.53
DDX55-210ENST00000543016 NCF1BA6NI72 391 aaPredicted RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 NCF1CA8MVU1 366 aaPredicted RBP11.73□□□□□ -0.53
DDX55-210ENST00000543016 B4E171 279 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 K7EPI3 171 aa11.73□□□□□ -0.53
DDX55-210ENST00000543016 TM9SF1O15321 606 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms