RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 AARS2Q5JTZ9 985 aaKnown RBP11.36□□□□□ -0.59
PTPN6-219ENST00000542848 IRAK1BP1Q5VVH5 260 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 KIRREL2Q6UWL6 708 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 COX15Q7KZN9 410 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 KCNMB4Q86W47 210 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 REXO1L1PQ8IX06 675 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 C2orf73Q8N5S3 287 aaPredicted RBP11.36□□□□□ -0.59
PTPN6-219ENST00000542848 LMNTD1Q8N9Z9 388 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 TTC29Q8NA56 475 aaPredicted RBP11.36□□□□□ -0.59
PTPN6-219ENST00000542848 DNAJB14Q8TBM8 379 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 RAD51AP1Q96B01 352 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 C16orf45Q96MC5 204 aaPredicted RBP11.36□□□□□ -0.59
PTPN6-219ENST00000542848 ZNF778Q96MU6 729 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 SELENOSQ9BQE4 189 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 SEMA3GQ9NS98 782 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 NTNG1Q9Y2I2 539 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 TCAF1Q9Y4C2 921 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 HS3ST3B1Q9Y662 390 aa11.36□□□□□ -0.59
PTPN6-219ENST00000542848 SCN3AQ9NY46 2000 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 PCNX1Q96RV3 2341 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 VSTM2BA6NLU5 285 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 USP27XA6NNY8 438 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 IQCF5A8MTL0 148 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 PRMT5O14744 637 aaPredicted RBP11.35□□□□□ -0.59
PTPN6-219ENST00000542848 KPNA5O15131 536 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 LIASO43766 372 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 FTCDO95954 541 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 COL8A1P27658 744 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 DCTP40126 519 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 TSFMP43897 325 aaKnown RBP11.35□□□□□ -0.59
PTPN6-219ENST00000542848 ETF1P62495 437 aaKnown RBP11.35□□□□□ -0.59
PTPN6-219ENST00000542848 HIF1AQ16665 826 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 TUBB8Q3ZCM7 444 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 TAX1BP1Q86VP1 789 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 KRT222Q8N1A0 295 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
PTPN6-219ENST00000542848 RAB42Q8N4Z0 105 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 PPHLN1Q8NEY8 458 aaKnown RBP11.35□□□□□ -0.59
PTPN6-219ENST00000542848 GSDMBQ8TAX9 411 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 HMGCLL1Q8TB92 370 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 LKAAEAR1Q8TD35 194 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.35□□□□□ -0.59
PTPN6-219ENST00000542848 ATG4AQ8WYN0 398 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 IL17FQ96PD4 163 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 PANX3Q96QZ0 392 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 LMF1Q96S06 567 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 LHPPQ9H008 270 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 CATSPERZQ9NTU4 200 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 CIDEBQ9UHD4 219 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 NOVA2Q9UNW9 492 aaKnown RBP11.35□□□□□ -0.59
PTPN6-219ENST00000542848 ZNF148Q9UQR1 794 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 KLK4Q9Y5K2 254 aa11.35□□□□□ -0.59
PTPN6-219ENST00000542848 HYKKA2RU49 373 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 CD3EAPO15446 510 aaKnown RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 CTSVO60911 334 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 IFNB1P01574 187 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 EDN3P14138 238 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 MCM3P25205 808 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 CCNFP41002 786 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 OR1D4P47884 311 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 VSX2P58304 361 aaPredicted RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 GTF3C1Q12789 2109 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 ZNF169Q14929 603 aaPredicted RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 RBBP7Q16576 425 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 PCID2Q5JVF3 399 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 WASHC2DQ5SRD0 308 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 B3GNTL1Q67FW5 361 aaPredicted RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 PTRHD1Q6GMV3 140 aaKnown RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 LDB1Q86U70 411 aaPredicted RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 LRRC6Q86X45 466 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 PARP9Q8IXQ6 854 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 MPP5Q8N3R9 675 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 RNF10Q8N5U6 811 aaKnown RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 OR11G2Q8NGC1 345 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 KIF18AQ8NI77 898 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 P2RY12Q9H244 342 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 SOX17Q9H6I2 414 aaPredicted RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 EPS8L2Q9H6S3 715 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 RRAGDQ9NQL2 400 aaPredicted RBP11.34□□□□□ -0.59
PTPN6-219ENST00000542848 CHRAC1Q9NRG0 131 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 RAB6BQ9NRW1 208 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 GNPTGQ9UJJ9 305 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 CSAG2Q9Y5P2 127 aa11.34□□□□□ -0.59
PTPN6-219ENST00000542848 ENO4A6NNW6 628 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 AP3B1O00203 1094 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 ALOX12BO75342 701 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 C1orf105O95561 183 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 APRTP07741 180 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 ETS1P14921 441 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 RPS3P23396 243 aaKnown RBP eCLIP11.33□□□□□ -0.6
PTPN6-219ENST00000542848 OCA2Q04671 838 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 CDC16Q13042 620 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 NAA25Q14CX7 972 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 TLR1Q15399 786 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 SEL1L2Q5TEA6 688 aa11.33□□□□□ -0.6
PTPN6-219ENST00000542848 RPUSD3Q6P087 351 aaKnown RBP11.33□□□□□ -0.6
PTPN6-219ENST00000542848 PRMT9Q6P2P2 845 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms