RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-226	ENST00000541968	PCDHGA5	Q9Y5G8	931 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	PCDHGA1	Q9Y5H4	931 aa		4.19	□□□□□ -1.74
RAP1B-226	ENST00000541968	LRRIQ4	A6NIV6	560 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	ENO4	A6NNW6	628 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	CCDC188	H7C350	402 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	HS3ST1	O14792	307 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	POLR3G	O15318	223 aa	Predicted RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	EIF3D	O15371	548 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SYNGR3	O43761	229 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	VEGFD	O43915	354 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SLITRK3	O94933	977 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	HSPA5	P11021	654 aa	Known RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	NEFH	P12036	1026 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	PDGFRA	P16234	1089 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SOX6	P35712	828 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	ARCN1	P48444	511 aa	Known RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	RAB28	P51157	221 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	MFAP4	P55083	255 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SNU13	P55769	128 aa	Known RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	KIAA1024L	P59773	190 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	PRKCE	Q02156	737 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	GABPB1	Q06547	395 aa	Predicted RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SYCP1	Q15431	976 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	FCN2	Q15485	313 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	HFE	Q30201	348 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZNF876P	Q49A33	203 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SFMBT2	Q5VUG0	894 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SHE	Q5VZ18	495 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	ARHGAP17	Q68EM7	881 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	TMEM270	Q6UE05	265 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZYG11A	Q6WRX3	759 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	KBTBD6	Q86V97	674 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	NRROS	Q86YC3	692 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	OR6C4	Q8NGE1	309 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	OR14L1P	Q8NHC6	308 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	THAP6	Q8TBB0	222 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	URGCP	Q8TCY9	931 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SLC44A1	Q8WWI5	657 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	RAB7B	Q96AH8	199 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	HDAC11	Q96DB2	347 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SGF29	Q96ES7	293 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	SCRN2	Q96FV2	425 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	EEF2KMT	Q96G04	330 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	HARBI1	Q96MB7	349 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	CEP295NL	Q96MC4	621 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	RBM14	Q96PK6	669 aa	Known RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	EGLN1	Q9GZT9	426 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	STMN4	Q9H169	189 aa	Predicted RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	LRMDA	Q9H2I8	198 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	OSGEPL1	Q9H4B0	414 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	TFB2M	Q9H5Q4	396 aa	Known RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	FAM153A	Q9UHL3	310 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	CAPN7	Q9Y6W3	813 aa		4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZNF644	Q9H582	1327 aa	Predicted RBP	4.18	□□□□□ -1.74
RAP1B-226	ENST00000541968	KDR	P35968	1356 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZCWPW2	A0A1B0GU75	182 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	HTR3E	A5X5Y0	456 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	OOEP	A6NGQ2	149 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	EIF3CL	B5ME19	914 aa	Known RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	RASGRF2	O14827	1237 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	CTAGE5	O15320	804 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	GMFG	O60234	142 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	DAB1	O75553	588 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	TBX6	O95947	436 aa	Predicted RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZNF883	P0CG24	379 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	CCDC192	P0DO97	292 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZNF182	P17025	639 aa	Predicted RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	GABRB1	P18505	474 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	DCT	P40126	519 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	APOBEC1	P41238	236 aa	Known RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	ETV1	P50549	477 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	CCR3	P51677	355 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	PMP22	Q01453	160 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	NIPAL4	Q0D2K0	466 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	MAD2L1	Q13257	205 aa	Predicted RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	GAMT	Q14353	236 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	DPCR1	Q3MIW9	517 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	LRRC23	Q53EV4	343 aa	Predicted RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	TSSK4	Q6SA08	328 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	RBM43	Q6ZSC3	357 aa	Known RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	GSTA5	Q7RTV2	222 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	SPATA19	Q7Z5L4	167 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	PI4KAP1	Q8N8J0	262 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	CAMKV	Q8NCB2	501 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	ZNF485	Q8NCK3	441 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	OR52K1	Q8NGK4	314 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	PSPC1	Q8WXF1	523 aa	Known RBP	4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	TM9SF4	Q92544	642 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	THRSP	Q92748	146 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	TEKT1	Q969V4	418 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	LGALS12	Q96DT0	336 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	KIFC3	Q9BVG8	833 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	STRA6	Q9BX79	667 aa		4.17	□□□□□ -1.74
RAP1B-226	ENST00000541968	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.17	□□□□□ -1.74

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