RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 CDC14CA4D256 554 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 H3BMM5 538 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 KPNA5O15131 536 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CPNE3O75131 537 aaKnown RBP13.72□□□□□ -0.21
LTBR-209ENST00000541102 SHBGP04278 402 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 RPN2P04844 631 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CYP2A7P20853 494 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 SAT1P21673 171 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 GP5P40197 560 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 RAB28P51157 221 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 NFATC3Q12968 1075 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 BMPR2Q13873 1038 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CCSMST1Q4G0I0 132 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CYHR1Q6ZMK1 362 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CDHR3Q6ZTQ4 885 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 DCUN1D3Q8IWE4 304 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 FAM20CQ8IXL6 584 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CPNE9Q8IYJ1 553 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 SLC38A9Q8NBW4 561 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 N4BP2L2Q92802 583 aaPredicted RBP13.72□□□□□ -0.21
LTBR-209ENST00000541102 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CYTH2Q99418 400 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CCDC68Q9H2F9 335 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 FAM60AQ9NP50 221 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 IKZF3Q9UKT9 509 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 RAB21Q9UL25 225 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 SLC39A10Q9ULF5 831 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 SPTA1P02549 2419 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 ATMQ13315 3056 aa13.72□□□□□ -0.21
LTBR-209ENST00000541102 CFAP46Q8IYW2 2715 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 A0A0J9YY10 115 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 B8ZZF3 427 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 TERTO14746 1132 aaKnown RBP13.71□□□□□ -0.21
LTBR-209ENST00000541102 KALRNO60229 2985 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 VPS26AO75436 327 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 TSPAN12O95859 305 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 KLK3P07288 261 aaPredicted RBP13.71□□□□□ -0.21
LTBR-209ENST00000541102 ABHD2P08910 425 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 SFTPCP11686 197 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 PEBP1P30086 187 aaKnown RBP13.71□□□□□ -0.21
LTBR-209ENST00000541102 PKLRP30613 574 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 PHBP35232 272 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 BDKRB1P46663 353 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 ITGA1P56199 1179 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 POLE2P56282 527 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 GPS2Q13227 327 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 KIR2DS3Q14952 304 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 ZIC1Q15915 447 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 KLHL38Q2WGJ6 581 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 TTC23LQ6PF05 361 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 UNC5DQ6UXZ4 953 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 PIWIL4Q7Z3Z4 852 aaKnown RBP13.71□□□□□ -0.21
LTBR-209ENST00000541102 C19orf47Q8N9M1 422 aaKnown RBP13.71□□□□□ -0.21
LTBR-209ENST00000541102 GABPB2Q8TAK5 448 aaPredicted RBP13.71□□□□□ -0.21
LTBR-209ENST00000541102 DCAKDQ8WVC6 231 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 EEF1AKMT1Q8WVE0 214 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 CDKL2Q92772 493 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 INPP5DQ92835 1189 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 TCTN2Q96GX1 697 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 GPR22Q99680 433 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 SLC7A5P2Q9GIP4 190 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 TWSG1Q9GZX9 223 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 CHST8Q9H2A9 424 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 ACTR5Q9H9F9 607 aaPredicted RBP13.71□□□□□ -0.21
LTBR-209ENST00000541102 GEMIN8Q9NWZ8 242 aaKnown RBP13.71□□□□□ -0.21
LTBR-209ENST00000541102 NSMCE4AQ9NXX6 385 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 KLHL20Q9Y2M5 609 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 COMMD10Q9Y6G5 202 aa13.71□□□□□ -0.21
LTBR-209ENST00000541102 A0A087WUV0 522 aaPredicted RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 C21orf140B9A014 251 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 POC1B-GALNT4F8VUJ3 575 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 MEN1O00255 615 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 PHGDHO43175 533 aaKnown RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 CREG1O75629 220 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 WISP3O95389 354 aaPredicted RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 CD9P21926 228 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 HSD17B3P37058 310 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 RPS18P62269 152 aaKnown RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 RPS15P62841 145 aaKnown RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 NFKB2Q00653 900 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 KCNAB2Q13303 367 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 NAB1Q13506 487 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 GRB7Q14451 532 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 SLC5A12Q1EHB4 618 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 DEFB110Q30KQ9 67 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 GRTP1Q5TC63 336 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 LCN10Q6JVE6 187 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 FAM45BPQ6NSW5 357 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 CMC1Q7Z7K0 106 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 LINC01555Q8NAE3 123 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 FLVCR1-AS1Q8TAF5 88 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 FAM45AQ8TCE6 357 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 ANKRD49Q8WVL7 239 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 APOBEC4Q8WW27 367 aaKnown RBP13.7□□□□□ -0.22
LTBR-209ENST00000541102 SLC44A1Q8WWI5 657 aa13.7□□□□□ -0.22
LTBR-209ENST00000541102 DLG3Q92796 817 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms