RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 GUCA1BQ9UMX6 200 aa6.28□□□□□ -1.4
TTR-203ENST00000541025 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.28□□□□□ -1.4
TTR-203ENST00000541025 CNOT1A5YKK6 2376 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 PRAMEF33A0A0G2JMD5 474 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 GOLGA6L3A6NEY3 463 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 A6NNZ2 444 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 F5H423 210 aaPredicted RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 FPGTO14772 594 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 MGST3O14880 152 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 YY2O15391 372 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 MPPED1O15442 326 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 PRAMEF10O60809 474 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 TUSC2O75896 110 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 C1QL1O75973 258 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 RECQL5O94762 991 aaPredicted RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 HEXIM1O94992 359 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 AGFG2O95081 481 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 MATN4O95460 622 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 TOP3BO95985 862 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 MT-CYBP00156 380 aaPredicted RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 PCCBP05166 539 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 ELFN1P0C7U0 828 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 CEACAM1P13688 526 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 MALP21145 153 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 RBL1P28749 1068 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 EPHA8P29322 1005 aaPredicted RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 HNF1BP35680 557 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 RXRGP48443 463 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 NR2C2P49116 596 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 SUOXP51687 545 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 RWDD2BP57060 319 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 POLR2LP62875 67 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 OTUD4Q01804 1114 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 ZNF844Q08AG5 666 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 OVGP1Q12889 678 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 EIF2B5Q13144 721 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 HNRNPA0Q13151 305 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 SGCGQ13326 291 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 SLC14A1Q13336 389 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 PDE1CQ14123 709 aaPredicted RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 GALEQ14376 348 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 GALNT3Q14435 633 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 ZNF267Q14586 743 aaPredicted RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 SLC45A4Q5BKX6 768 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 ARMC12Q5T9G4 340 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 DENND2CQ68D51 928 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 ERAP2Q6P179 960 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 ZNF567Q8N184 647 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 SLC25A45Q8N413 288 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 PAF1Q8N7H5 531 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 CCDC112Q8NEF3 446 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 DENND6BQ8NEG7 585 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 ACTL9Q8TC94 416 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 SAP25Q8TEE9 199 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 SETD7Q8WTS6 366 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 TFB1MQ8WVM0 346 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 P3H4Q92791 437 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 SCRN2Q96FV2 425 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 IMP4Q96G21 291 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 HES6Q96HZ4 224 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 LRGUKQ96M69 825 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 QKIQ96PU8 341 aaKnown RBP eCLIP6.27□□□□□ -1.41
TTR-203ENST00000541025 MCCC1Q96RQ3 725 aaPredicted RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 TCEAL2Q9H3H9 227 aaPredicted RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 ERVMER34-1Q9H9K5 563 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 PCDH9Q9HC56 1237 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 LZTFL1Q9NQ48 299 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 AMACRQ9UHK6 382 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 AMFRQ9UKV5 643 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 PHTF1Q9UMS5 762 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 R3HDM2Q9Y2K5 976 aaKnown RBP6.27□□□□□ -1.41
TTR-203ENST00000541025 PPIL1Q9Y3C6 166 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 OR1A2Q9Y585 309 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 PCDHGB2Q9Y5G2 931 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 RP1P56715 2156 aa6.27□□□□□ -1.41
TTR-203ENST00000541025 A0A0J9YYE9 177 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 SPTY2D1-AS1A0A0U1RR47 76 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 CFAP69A5D8W1 941 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 CAPN8A6NHC0 703 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 APOC4-APOC2K7ER74 178 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 SCAMP1O15126 338 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 SLC16A6O15403 523 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 FLRT2O43155 660 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 PROM1O43490 865 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 KRT86O43790 486 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 DFNA5O60443 496 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 SLC43A1O75387 559 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 PIAS2O75928 621 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 NEBLO76041 1014 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 SOD1P00441 154 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 TRBC1P01850 177 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 APOC2P02655 101 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 CCDC175P0C221 793 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 ATXN1LP0C7T5 689 aaKnown RBP6.26□□□□□ -1.41
TTR-203ENST00000541025 PIRTP0C851 137 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 GIMD1P0DJR0 217 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 RHCEP18577 417 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 DGKAP23743 735 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 HTR3AP46098 478 aa6.26□□□□□ -1.41
TTR-203ENST00000541025 RABIFP47224 123 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms