RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CRYBG2Q8N1P7 616 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SVOPLQ8N434 492 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SVOPQ8N4V2 548 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ZNF366Q8N895 744 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ARL14EPQ8N8R7 260 aaPredicted RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 GLB1L3Q8NCI6 653 aaPredicted RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 RHOXF1Q8NHV9 184 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 MCOLN3Q8TDD5 553 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ST8SIA2Q92186 375 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 RPL3LQ92901 407 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 TSGA13Q96PP4 275 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SLC2A13Q96QE2 648 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 KCNA7Q96RP8 456 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 RBM4BQ9BQ04 359 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 TCF25Q9BQ70 676 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 RHNO1Q9BSD3 238 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 RBM4Q9BWF3 364 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 AMBRA1Q9C0C7 1298 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ASB8Q9H765 288 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ANKHQ9HCJ1 492 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SLC52A3Q9NQ40 469 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 TREX1Q9NSU2 369 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 TMEM30AQ9NV96 361 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 INTS7Q9NVH2 962 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 C3orf18Q9UK00 162 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 GTF2A1LQ9UNN4 478 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SNX8Q9Y5X2 465 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 GPR45Q9Y5Y3 372 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 RANBP2P49792 3224 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 TDRD15B5MCY1 1934 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 SAGE2PA6NJ88 616 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SLC9A3R1O14745 358 aaPredicted RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 HS6ST1O60243 411 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 CCNKO75909 580 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 NDST3O95803 873 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 CYBAP13498 195 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ATF4P18848 351 aaPredicted RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 SERPINA4P29622 427 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 CD86P42081 329 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 CCR4P51679 360 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 MRPS15P82914 257 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 IL5RAQ01344 420 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 EMX1Q04741 257 aaPredicted RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 SCAPQ12770 1279 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SLC14A2Q15849 920 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ZNF181Q2M3W8 571 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 DENND5AQ6IQ26 1287 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 PAQR9Q6ZVX9 377 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 MTSS1LQ765P7 747 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 PRSS48Q7RTY5 328 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 KLHDC8BQ8IXV7 354 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 LRRC52Q8N7C0 313 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 PNPLA1Q8N8W4 532 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 MCFD2Q8NI22 146 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 MED30Q96HR3 178 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 FCRL2Q96LA5 508 aaPredicted RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 FCRL5Q96RD9 977 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 TSEN34Q9BSV6 310 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 UGT2B28Q9BY64 529 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 GLOD4Q9HC38 313 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ABCC13Q9NSE7 274 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 AIG1Q9NVV5 245 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 PAK1IP1Q9NWT1 392 aaPredicted RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 USE1Q9NZ43 259 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 DNAJB9Q9UBS3 223 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 INTS6Q9UL03 887 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 MKL2Q9ULH7 1088 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 MIA3Q5JRA6 1907 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 PLXNA3P51805 1871 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 LOC100130705A0A1B0GUX0 176 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 MYBPHLA2RUH7 354 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 FAM172BPA6NC97 362 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 CENPBD1B2RD01 187 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ATP6V1G2-DDX39BF2Z307 99 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 RAD51BO15315 384 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 CACNG3O60359 315 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SLC22A3O75751 556 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SIX3O95343 332 aaPredicted RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 ANGPTL1O95841 491 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 CST1P01037 141 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 GSTM1P09488 218 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 HTR2BP41595 481 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 CHRNA4P43681 627 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 GPR1P46091 355 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ST13P50502 369 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 POLR2JP52435 117 aaKnown RBP5.11□□□□□ -1.59
PROM1-220ENST00000540805 SEC13P55735 322 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 NCS1P62166 190 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 VAC14Q08AM6 782 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 DGCR6Q14129 220 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 PTPRRQ15256 657 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 PLA2G4EQ3MJ16 856 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 IGSF11Q5DX21 431 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 LRRC73Q5JTD7 316 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ZNF691Q5VV52 312 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SLX4IPQ5VYV7 408 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 SPESP1Q6UW49 350 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 HFE2Q6ZVN8 426 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 MILR1Q7Z6M3 343 aa5.11□□□□□ -1.59
PROM1-220ENST00000540805 ISCA2Q86U28 154 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms