RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 CAPN1P07384 714 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 F7P08709 466 aaPredicted RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 MPC1LP0DKB6 136 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 ERVK-10P10266 1014 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 NR1D1P20393 614 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 ALAS2P22557 587 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 IVDP26440 423 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 CMPK1P30085 196 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 RPA3P35244 121 aaPredicted RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 GRIA3P42263 894 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 CSRP3P50461 194 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 CUL1Q13616 776 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 TSTA3Q13630 321 aaPredicted RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 YOD1Q5VVQ6 348 aaPredicted RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 ZNF385CQ66K41 422 aaPredicted RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 FCRL6Q6DN72 434 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 LRRC8EQ6NSJ5 796 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 ZNF549Q6P9A3 640 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 RAB43Q86YS6 212 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 TTC29Q8NA56 475 aaPredicted RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 C2CD4AQ8NCU7 369 aaPredicted RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 OR2L3Q8NG85 312 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 GBP5Q96PP8 586 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 SELENOSQ9BQE4 189 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 AARSD1Q9BTE6 412 aaKnown RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 EPN3Q9H201 632 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 PPANQ9NQ55 473 aaKnown RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 ACSS2Q9NR19 701 aa16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 IFT80Q9P2H3 777 aaPredicted RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 DHCR7Q9UBM7 475 aaKnown RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 TRMT6Q9UJA5 497 aaKnown RBP16.47■□□□□ 0.23
CACNA2D4-211ENST00000540728 KRT87PA6NCN2 255 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 MYO1CO00159 1063 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 EIF3FO00303 357 aaPredicted RBP16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 NDC80O14777 642 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 ZBTB14O43829 449 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 SRPX2O60687 465 aaPredicted RBP16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 BANF1O75531 89 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 SYF2O95926 243 aaKnown RBP16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 PIM1P11309 404 aaPredicted RBP16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 PSMB5P28074 263 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 SKIV2L2P42285 1042 aaKnown RBP16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 RGS4P49798 205 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 ARL4CP56559 192 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 GRM7Q14831 915 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 HIF1AQ16665 826 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 NKAIN1Q4KMZ8 207 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 MSS51Q4VC12 460 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 COLEC12Q5KU26 742 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 TCTN3Q6NUS6 607 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 KIAA0408Q6ZU52 694 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 OR2A1Q8NGT9 310 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 GIMAP7Q8NHV1 300 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 LRRC39Q96DD0 335 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 SNF8Q96H20 258 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 SLC30A3Q99726 388 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 UTP6Q9NYH9 597 aaKnown RBP16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 ZC3H7BQ9UGR2 993 aaKnown RBP16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 TLK1Q9UKI8 766 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 MED16Q9Y2X0 877 aa16.46■□□□□ 0.23
CACNA2D4-211ENST00000540728 ARGFXA6NJG6 315 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 TTI1O43156 1089 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 DNAJB5O75953 348 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 CCNDBP1O95273 360 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 CTSBP07858 339 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 ERGP11308 486 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 ELK3P41970 407 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 CARSP49589 748 aaKnown RBP16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 ITGA8P53708 1063 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 PNLIPRP1P54315 467 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 FASTKQ14296 549 aaKnown RBP16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 FAM214AQ32MH5 1076 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 HIBCHQ6NVY1 386 aaPredicted RBP16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 TTLL10Q6ZVT0 673 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 PALM2Q8IXS6 379 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 CPNE9Q8IYJ1 553 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 FBXO15Q8NCQ5 510 aaPredicted RBP16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 CD200R1Q8TD46 325 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 ADAMTS17Q8TE56 1095 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 ASB11Q8WXH4 323 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 CERS2Q96G23 380 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 CFAP36Q96G28 342 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 IP6K3Q96PC2 410 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 PKP4Q99569 1192 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 TRIM51Q9BSJ1 452 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 ACAT2Q9BWD1 397 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 TRIM31Q9BZY9 425 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 ING2Q9H160 280 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 MRPS30Q9NP92 439 aaKnown RBP16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 TAS2R13Q9NYV9 303 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 ANAPC2Q9UJX6 822 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 G3BP2Q9UN86 482 aaKnown RBP16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 KLK4Q9Y5K2 254 aa16.45■□□□□ 0.22
CACNA2D4-211ENST00000540728 BSNQ9UPA5 3926 aa16.44■□□□□ 0.22
CACNA2D4-211ENST00000540728 A0A1B0GX78 115 aa16.44■□□□□ 0.22
CACNA2D4-211ENST00000540728 A0A1W2PPV9 198 aa16.44■□□□□ 0.22
CACNA2D4-211ENST00000540728 EFCAB8A8MWE9 144 aa16.44■□□□□ 0.22
CACNA2D4-211ENST00000540728 MCM3P25205 808 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms