RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 OR9A1PQ8NGU1 263 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 CALML6Q8TD86 181 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 ACTRT1Q8TDG2 376 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 ANP32BQ92688 251 aaKnown RBP8.65□□□□□ -1.02
LMO3-222ENST00000540445 FER1L6-AS2Q96M78 137 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 SERPINB12Q96P63 405 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 IP6K3Q96PC2 410 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 GBP5Q96PP8 586 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 ACAT2Q9BWD1 397 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 MLXIPLQ9NP71 852 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 FBXO6Q9NRD1 293 aaPredicted RBP8.65□□□□□ -1.02
LMO3-222ENST00000540445 ABCF3Q9NUQ8 709 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 ZC3H7BQ9UGR2 993 aaKnown RBP8.65□□□□□ -1.02
LMO3-222ENST00000540445 ZNF451Q9Y4E5 1061 aa8.65□□□□□ -1.02
LMO3-222ENST00000540445 PCDHGA9Q9Y5G4 932 aaKnown RBP8.65□□□□□ -1.02
LMO3-222ENST00000540445 A0A0J9YVX5 310 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 HYKKA2RU49 373 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 DSCR3O14972 297 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 ZBTB14O43829 449 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 PRICKLE3O43900 615 aaPredicted RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 SRPX2O60687 465 aaPredicted RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 HAUS5O94927 633 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 FKBP9O95302 570 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 SYF2O95926 243 aaKnown RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 CATP04040 527 aaKnown RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 F7P08709 466 aaPredicted RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 MCM3P25205 808 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 CMPK1P30085 196 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 RPA3P35244 121 aaPredicted RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 CD97P48960 835 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 VSX2P58304 361 aaPredicted RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 SRSF1Q07955 248 aaKnown RBP eCLIP8.64□□□□□ -1.03
LMO3-222ENST00000540445 CUL1Q13616 776 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 RAPSNQ13702 412 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 FASTKQ14296 549 aaKnown RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 ESPL1Q14674 2120 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 CYP2A13Q16696 494 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 TTLL9Q3SXZ7 439 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 NADK2Q4G0N4 442 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 HSP90AA5PQ58FG0 334 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 WASHC2DQ5SRD0 308 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 SUSD1Q6UWL2 747 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 PCGF5Q86SE9 256 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 ATCAYQ86WG3 371 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 EFCAB3Q8N7B9 438 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 CLEC1AQ8NC01 280 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 OR2L3Q8NG85 312 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 OR2A1Q8NGT9 310 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 OR2Y1Q8NGV0 311 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 GABPB2Q8TAK5 448 aaPredicted RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 MIB2Q96AX9 1013 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 SIGLEC10Q96LC7 697 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 DPH7Q9BTV6 452 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 MRPS30Q9NP92 439 aaKnown RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 FAM114A2Q9NRY5 505 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 IARS2Q9NSE4 1012 aaKnown RBP8.64□□□□□ -1.03
LMO3-222ENST00000540445 CUTCQ9NTM9 273 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 GPR83Q9NYM4 423 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 SPATA7Q9P0W8 599 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 ASIC3Q9UHC3 531 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 SNX12Q9UMY4 172 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 PLAAQ9Y263 795 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 NEU2Q9Y3R4 380 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 NBPF19A0A087WUL8 3843 aa8.64□□□□□ -1.03
LMO3-222ENST00000540445 USP9XQ93008 2570 aaPredicted RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 ZCWPW2A0A1B0GU75 182 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 A0A1B0GX78 115 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 ZNF839A8K0R7 811 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 CES2O00748 559 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 DPM1O60762 260 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 CTSVO60911 334 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 VPS26AO75436 327 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 PSIP1O75475 530 aaKnown RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 CEACAM4O75871 244 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 IGHEP01854 428 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 ERVK-10P10266 1014 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 TCP1P17987 556 aaKnown RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 ATP5DP30049 168 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 SLC1A2P43004 574 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 OR1D4P47884 311 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 FNTAP49354 379 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 CLCN7P51798 805 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 FOXL2P58012 376 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 NAA25Q14CX7 972 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 THEMIS2Q5TEJ8 643 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 YOD1Q5VVQ6 348 aaPredicted RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 PAPD7Q5XG87 772 aaKnown RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 FRMPD2BQ6IN97 320 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 UGT3A1Q6NUS8 523 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 MRPL14Q6P1L8 145 aaKnown RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 SHISA6Q6ZSJ9 500 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 OVCH1Q7RTY7 1134 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 KCNMB4Q86W47 210 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 PALM2Q8IXS6 379 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 LMNTD2Q8IXW0 634 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 METTL27Q8N6F8 245 aaPredicted RBP8.63□□□□□ -1.03
LMO3-222ENST00000540445 NAT8LQ8N9F0 302 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.63□□□□□ -1.03
LMO3-222ENST00000540445 PPFIBP2Q8ND30 876 aa8.63□□□□□ -1.03
LMO3-222ENST00000540445 HMGCLL1Q8TB92 370 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms