RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 CCDC91Q7Z6B0 441 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 CLEC14AQ86T13 490 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 TBC1D1Q86TI0 1168 aaPredicted RBP6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 TRIM73Q86UV7 250 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 FAM129CQ86XR2 697 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 HOMEZQ8IX15 550 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 SYTL1Q8IYJ3 562 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 D2HGDHQ8N465 521 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 FBXO39Q8N4B4 442 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 SPATA6LQ8N4H0 392 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 MREGQ8N565 214 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 C2orf73Q8N5S3 287 aaPredicted RBP6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 C19orf47Q8N9M1 422 aaKnown RBP6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 PPFIBP2Q8ND30 876 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 OR2A1Q8NGT9 310 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 MCOLN3Q8TDD5 553 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 MZB1Q8WU39 189 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 PMEPA1Q969W9 287 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC22A18Q96BI1 424 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 PTERQ96BW5 349 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 CCDC138Q96M89 665 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 TRAPPC9Q96Q05 1148 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 PPCSQ9HAB8 311 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 IGSF5Q9NSI5 407 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 ARL15Q9NXU5 204 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 UTP6Q9NYH9 597 aaKnown RBP6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 AKAP7Q9P0M2 348 aaPredicted RBP6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 DKK4Q9UBT3 224 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 CTNNAL1Q9UBT7 734 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 PISDQ9UG56 409 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 LNPEPQ9UIQ6 1025 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 ACOT9Q9Y305 439 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 OARD1Q9Y530 152 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 FER1L5A0AVI2 2057 aa6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 MAP1BP46821 2468 aaKnown RBP6.73□□□□□ -1.33
LPCAT3-209ENST00000540060 DSPP15924 2871 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 ACACBO00763 2458 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 USP24Q9UPU5 2620 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 A0A096LPK6 155 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 PABPN1LA6NDY0 278 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC9B1P1A6NJY1 282 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 B4E171 279 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 C9orf172C9J069 976 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 RFPL1O75677 317 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TNFSF15O95150 251 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 KLHL2O95198 593 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 FKBP9O95302 570 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 GUCA1CO95843 209 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TUBBP07437 444 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 SNRPAP09012 282 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 LTA4HP09960 611 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 HIST1H2AGP0C0S8 130 aaPredicted RBP6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 MSL3P1P0C860 447 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 JMJD7P0C870 316 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 EBLN1P0CF75 366 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 FOLR1P15328 257 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TFEBP19484 476 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 HIST1H2ADP20671 130 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 MAGP20916 626 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TYK2P29597 1187 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TSPAN7P41732 249 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 GABRA4P48169 554 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 MAPK10P53779 464 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 RAB15P59190 212 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 YBX1P67809 324 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 HSD11B2P80365 405 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 MC2RQ01718 297 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TUBB3Q13509 450 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 KCNAB1Q14722 419 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 RASA2Q15283 850 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TGFBIQ15582 683 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 ZIC1Q15915 447 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 KIAA1614Q5VZ46 1190 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 AGTRAPQ6RW13 159 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 SUSD1Q6UWL2 747 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 FRA10AC1Q70Z53 315 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TDRPQ86YL5 185 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 FAM20CQ8IXL6 584 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 PARP9Q8IXQ6 854 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 LSMEM2Q8N112 164 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 CNPY4Q8N129 248 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 ZSCAN1Q8NBB4 408 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 OR2L3Q8NG85 312 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 OR2W6PQ8NHA6 318 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 MDM1Q8TC05 714 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 EPS8L3Q8TE67 593 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 KCTD4Q8WVF5 259 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 SMPDL3AQ92484 453 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 KIAA1191Q96A73 305 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 FBXL8Q96CD0 374 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 MTBPQ96DY7 904 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 HIST1H2AHQ96KK5 128 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC46A1Q96NT5 459 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 ATOH8Q96SQ7 321 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 MIPEPQ99797 713 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 HIST1H2AJQ99878 128 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 H2AFJQ9BTM1 129 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 DDA1Q9BW61 102 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 SGPP1Q9BX95 441 aa6.72□□□□□ -1.33
LPCAT3-209ENST00000540060 TRIM54Q9BYV2 358 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms