RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ISM1B1AKI9 464 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 TARM1B6A8C7 271 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 BTN3A3O00478 584 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 TM4SF5O14894 197 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 RFPL3O75679 317 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 CDK4P11802 303 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 CEACAM1P13688 526 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 ATP5F1P24539 256 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 CD1CP29017 333 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 SQSTM1Q13501 440 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 FASTKQ14296 549 aaKnown RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 CLPPQ16740 277 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 THEMIS2Q5TEJ8 643 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 NKAIN2Q5VXU1 208 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 TRIM73Q86UV7 250 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 TAX1BP1Q86VP1 789 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 PLXDC1Q8IUK5 500 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 SLC22A9Q8IVM8 553 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 PPFIBP2Q8ND30 876 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 CCDC126Q96EE4 140 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 PHF21BQ96EK2 531 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 ZDHHC12Q96GR4 267 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 PCBD2Q9H0N5 130 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 C12orf65Q9H3J6 166 aaKnown RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 SYNDIG1Q9H7V2 258 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 NKIRAS1Q9NYS0 192 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 SLC17A7Q9P2U7 560 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 EPHA6Q9UF33 1036 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 PCDHB11Q9Y5F2 797 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 TNPO3Q9Y5L0 923 aaKnown RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 PCNX2A6NKB5 2137 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 RP1P56715 2156 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 KLK8O60259 260 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 STK16O75716 305 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 CPNE6O95741 557 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 SBK3P0C264 359 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 CPA3P15088 417 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 HPDP32754 393 aaPredicted RBP14.91□□□□□ -0.02
DDB1-216ENST00000539739 GGT5P36269 586 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 PLA2G5P39877 138 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 CCDC157Q569K6 752 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 IRGCQ6NXR0 463 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 WDR74Q6RFH5 385 aaPredicted RBP14.91□□□□□ -0.02
DDB1-216ENST00000539739 SUSD1Q6UWL2 747 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 ZYG11AQ6WRX3 759 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 USP53Q70EK8 1073 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 ALYREFQ86V81 257 aaKnown RBP14.91□□□□□ -0.02
DDB1-216ENST00000539739 PTGR2Q8N8N7 351 aaPredicted RBP14.91□□□□□ -0.02
DDB1-216ENST00000539739 LMNTD1Q8N9Z9 388 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 OR56A3Q8NH54 315 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 SREK1Q8WXA9 508 aaKnown RBP14.91□□□□□ -0.02
DDB1-216ENST00000539739 GFM1Q96RP9 751 aaKnown RBP14.91□□□□□ -0.02
DDB1-216ENST00000539739 MIPEPQ99797 713 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 SELENOSQ9BQE4 189 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 RAB33BQ9H082 229 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 SLC24A3Q9HC58 644 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 ABCF3Q9NUQ8 709 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 ACTR10Q9NZ32 417 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 COPG2Q9UBF2 871 aa14.91□□□□□ -0.02
DDB1-216ENST00000539739 TMEM120BA0PK00 339 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 STX16-NPEPL1H3BU86 382 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 STX16O14662 325 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 CAPN5O15484 640 aaPredicted RBP14.9□□□□□ -0.02
DDB1-216ENST00000539739 TAPBPO15533 448 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 DLX3O60479 287 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 GCKP35557 465 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 HSPA7P48741 367 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 SLC18A1P54219 525 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 TBPL1P62380 186 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 NFKB2Q00653 900 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 SPIDRQ14159 915 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 RSPO4Q2I0M5 234 aaPredicted RBP14.9□□□□□ -0.02
DDB1-216ENST00000539739 PTCHD3Q3KNS1 767 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 LRRC56Q8IYG6 542 aaPredicted RBP14.9□□□□□ -0.02
DDB1-216ENST00000539739 ANKRD42Q8N9B4 389 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 UBTD2Q8WUN7 234 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 PYCR2Q96C36 320 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 RTKNQ9BST9 563 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 CD244Q9BZW8 370 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 SPHK1Q9NYA1 384 aa14.9□□□□□ -0.02
DDB1-216ENST00000539739 APOBEC2Q9Y235 224 aaKnown RBP14.9□□□□□ -0.02
DDB1-216ENST00000539739 A0A1W2PQM1 296 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 A8MT66 165 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 G3V2L1 256 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 PDLIM1O00151 329 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 AHCYL1O43865 530 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 CCNT2O60583 730 aaKnown RBP14.89□□□□□ -0.03
DDB1-216ENST00000539739 WDR47O94967 919 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 CCNDBP1O95273 360 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 FKBP9O95302 570 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 PRDX3P30048 256 aaKnown RBP14.89□□□□□ -0.03
DDB1-216ENST00000539739 SLC6A12P48065 614 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 NOVA1P51513 510 aaKnown RBP14.89□□□□□ -0.03
DDB1-216ENST00000539739 CLNS1AP54105 237 aaKnown RBP14.89□□□□□ -0.03
DDB1-216ENST00000539739 ASPHQ12797 758 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 SF1Q15637 639 aaKnown RBP14.89□□□□□ -0.03
DDB1-216ENST00000539739 C18orf21Q32NC0 220 aaPredicted RBP14.89□□□□□ -0.03
DDB1-216ENST00000539739 FBXO48Q5FWF7 155 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 PRAMEF13Q5VWM6 474 aa14.89□□□□□ -0.03
DDB1-216ENST00000539739 METTL2BQ6P1Q9 378 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms