RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CIDECQ96AQ7 238 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 HMCESQ96FZ2 354 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FAM84BQ96KN1 310 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 KLHL5Q96PQ7 755 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 LMF2Q9BU23 707 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 WRAP53Q9BUR4 548 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DNAJC4Q9NNZ3 241 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TCF7L2Q9NQB0 619 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ACOXLQ9NUZ1 547 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DNAJC17Q9NVM6 304 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SPG21Q9NZD8 308 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF224Q9NZL3 707 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CNIH4Q9P003 139 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 KCNN3Q9UGI6 736 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CCPG1Q9ULG6 757 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TCF19Q9Y242 345 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 YIPF1Q9Y548 306 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ASTN1O14525 1302 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FRMPD3Q5JV73 1810 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TRAV34A0A0B4J273 112 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 IGLV5-39A0A0G2JS06 123 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 C5orf51A6NDU8 294 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 OR6C76A6NM76 312 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SRRM4A7MD48 611 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM110-MUSTN1A8MSY1 372 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 STMND1H3BQB6 276 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PCDH7O60245 1069 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FMO6PO60774 539 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MTRF1O75570 445 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PGLSO95336 258 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TRIM16O95361 564 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MOCS2O96007 188 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 EGFP01133 1207 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SLC4A1P02730 911 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 YES1P07947 543 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PLA2G4BP0C869 781 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SPP1P10451 314 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 H2AFXP16104 143 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 S1PR1P21453 382 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ALDH4A1P30038 563 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 NMT1P30419 496 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ALDH1B1P30837 517 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RABIFP47224 123 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TRPC1P48995 793 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PLCD1P51178 756 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CDH12P55289 794 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CLDN20P56880 219 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SULT2A1Q06520 285 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CRYZQ08257 329 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MFAP5Q13361 173 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MTX1Q13505 466 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 NAE1Q13564 534 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ZRSR1Q15695 479 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 GRTP1Q5TC63 336 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DCAF12L2Q5VW00 463 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TCEAL6Q6IPX3 200 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RGMBQ6NW40 437 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM182Q6ZP80 229 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MON1BQ7L1V2 547 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DET1Q7L5Y6 550 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DGLUCYQ7Z3D6 616 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ARHGAP30Q7Z6I6 1101 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TMPRSS11BQ86T26 416 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 LDB1Q86U70 411 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 MFN1Q8IWA4 741 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FAM114A1Q8IWE2 563 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ARL6IP6Q8N6S5 226 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PCDH20Q8N6Y1 951 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 EMC1Q8N766 993 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RASGEF1AQ8N9B8 481 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 NCOA7Q8NI08 942 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SPATA20Q8TB22 786 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ELP5Q8TE02 316 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RNF128Q8TEB7 428 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 LPGAT1Q92604 370 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC47Q96A33 483 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PINX1Q96BK5 328 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TMEM237Q96Q45 408 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ACPTQ9BZG2 426 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TM6SF1Q9BZW5 370 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ABCG4Q9H172 646 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ISCUQ9H1K1 167 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 FOXP1Q9H334 677 aaPredicted RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TFB2MQ9H5Q4 396 aaKnown RBP0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ECT2Q9H8V3 914 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 TUFT1Q9NNX1 390 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 DPP3Q9NY33 737 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PTGDR2Q9Y5Y4 395 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 PTPRCP08575 1304 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 ANK2Q01484 3957 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 RNF123Q5XPI4 1314 aa0.99□□□□□ -2.25
HIF1A-204ENST00000539097 SYNJ2BP-COX16A0A087WUM0 186 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 IGLV5-52A0A0A0MRZ9 124 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 TEX13DA0A0J9YY54 714 aaPredicted RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 INAFM1C9JVW0 142 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 J3QR06 171 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 M0QZ24 198 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 DNM1LO00429 736 aa0.98□□□□□ -2.25
HIF1A-204ENST00000539097 RNF113AO15541 343 aaKnown RBP0.98□□□□□ -2.25
HIF1A-204ENST00000539097 LDB3O75112 727 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms