RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 BEND7Q8N7W2 519 aaPredicted RBP11.64□□□□□ -0.55
CPNE8-203ENST00000538596 DDHD1Q8NEL9 900 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 NODALQ96S42 347 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 P2RY13Q9BPV8 354 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 KCTD5Q9NXV2 234 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 ASIC5Q9NY37 505 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 TMPRSS11EQ9UL52 423 aa11.64□□□□□ -0.55
CPNE8-203ENST00000538596 PLXNB3Q9ULL4 1909 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 KCNE1BA0A087WTH5 132 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 C16orf96A6NNT2 1141 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 CLPXO76031 633 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 EMX1Q04741 257 aaPredicted RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 NR1D2Q14995 579 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 SMN1Q16637 294 aaKnown RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 ZCCHC8Q6NZY4 707 aaKnown RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 DCDC5Q6ZRR9 648 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 FOXJ1Q92949 421 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 MUL1Q969V5 352 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 TRMT2BQ96GJ1 504 aaKnown RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 COPS8Q99627 209 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 SLC29A3Q9BZD2 475 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 RAD21L1Q9H4I0 556 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 ARMC7Q9H6L4 198 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 GPN2Q9H9Y4 310 aaPredicted RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 THG1LQ9NWX6 298 aaKnown RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 ERVK-18Q9QC07 812 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 INHAP05111 366 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 IGFBP5P24593 272 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 AOAHP28039 575 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 SERPINA4P29622 427 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 DAPP51397 102 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 ITGADQ13349 1161 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 TUBA3CQ13748 450 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 SMU1Q2TAY7 513 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 GPR33Q49SQ1 333 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 ZNF648Q5T619 568 aaPredicted RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 SNX29P2Q8IUI4 249 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 RNF168Q8IYW5 571 aaPredicted RBP11.63□□□□□ -0.55
CPNE8-203ENST00000538596 CENPSQ8N2Z9 138 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 UBE2FQ969M7 185 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 ZDHHC3Q9NYG2 299 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 CFAP97Q9P2B7 532 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 MAN2B2Q9Y2E5 1009 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 CDH23Q9H251 3354 aa11.63□□□□□ -0.55
CPNE8-203ENST00000538596 YY2O15391 372 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 HOXA2O43364 376 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 IGSF6O95976 241 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 ALDH1A1P00352 501 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 FUCA1P04066 466 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CKMP06732 381 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 OPRL1P41146 370 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 DDX39BQ13838 428 aaKnown RBP11.62□□□□□ -0.55
CPNE8-203ENST00000538596 PLEKHG6Q3KR16 790 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 LYPLAL1Q5VWZ2 237 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 ADNP2Q6IQ32 1131 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CLECL1Q8IZS7 167 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 ABHD11Q8NFV4 315 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 OR2AP1Q8NGE2 309 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 OR52E4Q8NGH9 312 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 REXO5Q96IC2 774 aaKnown RBP11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CEP295NLQ96MC4 621 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 REXO4Q9GZR2 422 aaKnown RBP11.62□□□□□ -0.55
CPNE8-203ENST00000538596 IL21Q9HBE4 155 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 SNX5Q9Y5X3 404 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 ZNF106Q9H2Y7 1883 aaKnown RBP11.62□□□□□ -0.55
CPNE8-203ENST00000538596 AGAP14A8MT82 685 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 ANGPTL1O95841 491 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 SRCP12931 536 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 HALP42357 657 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CLK3P49761 638 aaKnown RBP11.62□□□□□ -0.55
CPNE8-203ENST00000538596 VLDLRP98155 873 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 EPS8Q12929 822 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CTF1Q16619 201 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 NOXRED1Q6NXP6 359 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 RNF165Q6ZSG1 346 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CYP2U1Q7Z449 544 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 B3GNT8Q7Z7M8 397 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CMTM8Q8IZV2 173 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 CHCHD4Q8N4Q1 142 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 MCOLN3Q8TDD5 553 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 FAR1Q8WVX9 515 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 COX4I2Q96KJ9 171 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 MTERF1Q99551 399 aaKnown RBP11.62□□□□□ -0.55
CPNE8-203ENST00000538596 TSEN34Q9BSV6 310 aaKnown RBP11.62□□□□□ -0.55
CPNE8-203ENST00000538596 ZDHHC6Q9H6R6 413 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 MAGIXQ9H6Y5 334 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 RMND5AQ9H871 391 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 AASDHPPTQ9NRN7 309 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 BLOC1S6Q9UL45 172 aa11.62□□□□□ -0.55
CPNE8-203ENST00000538596 WNT9AO14904 365 aa11.61□□□□□ -0.55
CPNE8-203ENST00000538596 SLC16A6O15403 523 aa11.61□□□□□ -0.55
CPNE8-203ENST00000538596 SOCS5O75159 536 aa11.61□□□□□ -0.55
CPNE8-203ENST00000538596 RECQL5O94762 991 aaPredicted RBP11.61□□□□□ -0.55
CPNE8-203ENST00000538596 CPSF4O95639 269 aaKnown RBP11.61□□□□□ -0.55
CPNE8-203ENST00000538596 UGT2B4P06133 528 aa11.61□□□□□ -0.55
CPNE8-203ENST00000538596 OCM2P0CE71 109 aa11.61□□□□□ -0.55
CPNE8-203ENST00000538596 OCMP0CE72 109 aaPredicted RBP11.61□□□□□ -0.55
CPNE8-203ENST00000538596 AMD1P17707 334 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms