RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TMEM40Q8WWA1 233 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 JPH3Q8WXH2 748 aaPredicted RBP18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 RNF170Q96K19 258 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 ZFYVE19Q96K21 471 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 CEP19Q96LK0 163 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 CHCHD6Q9BRQ6 235 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 POLR1EQ9GZS1 481 aaKnown RBP18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 IRF2BPLQ9H1B7 796 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 KCNH6Q9H252 994 aa18.12■□□□□ 0.49
SFSWAP-207ENST00000538548 OTOFQ9HC10 1997 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 GLTPD2A6NH11 291 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 RRN3P2A6NIE6 340 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 GJB3O75712 270 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 YES1P07947 543 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 PKMP14618 531 aaKnown RBP18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 RHOQP17081 205 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 CD9P21926 228 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 TIE1P35590 1138 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 RGS6P49758 472 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 CD200R1Q8TD46 325 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 NEDD4LQ96PU5 975 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 RBPJLQ9UBG7 517 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 VPS9D1Q9Y2B5 631 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 KLK4Q9Y5K2 254 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 PAPPA2Q9BXP8 1791 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 CLCA1A8K7I4 914 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 hCG_2039718K7EN88 272 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 NIPSNAP2O75323 286 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 DIRAS1O95057 198 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 RRM2P31350 389 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 PBX3P40426 434 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 SLC19A1P41440 591 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 ZNF140P52738 457 aaPredicted RBP18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 OLR1P78380 273 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 DUSP7Q16829 419 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 PARP15Q460N3 678 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 MILR1Q7Z6M3 343 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 OR8H2Q8N162 312 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 CARNMT1Q8N4J0 409 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 DNAJC22Q8N4W6 341 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 RAD9AQ99638 391 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 FKBP14Q9NWM8 211 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 MAN2B2Q9Y2E5 1009 aa18.11■□□□□ 0.49
SFSWAP-207ENST00000538548 PLXNB2O15031 1838 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 KRT87PA6NCN2 255 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ARHGAP33O14559 1287 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ICMTO60725 284 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 SLITRK5O94991 958 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 CYP2A7P20853 494 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 HNF4AP41235 474 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ARMCX4Q5H9R4 360 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ZNF438Q7Z4V0 828 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 CYP4Z2PQ8N1L4 340 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 GABARAPL3Q9BY60 117 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 IPPKQ9H8X2 491 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 SERHLQ9NQF3 203 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 RPRD1BQ9NQG5 326 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 PRDM5Q9NQX1 630 aaPredicted RBP18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 TMEM248Q9NWD8 314 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ASIC5Q9NY37 505 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 SPASTQ9UBP0 616 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ZMYM5Q9UJ78 669 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 GPSM3Q9Y4H4 160 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 SEMG1P04279 462 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ADORA3P0DMS8 318 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 GNPDA1P46926 289 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 CEP78Q5JTW2 689 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 WDR45BQ5MNZ6 344 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 NOXA1Q86UR1 476 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 GGHQ92820 318 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 COL21A1Q96P44 957 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ARPC5LQ9BPX5 153 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ZBED2Q9BTP6 218 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 ZYG11BQ9C0D3 744 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 TNKS2Q9H2K2 1166 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 REEP1Q9H902 201 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 SIRT5Q9NXA8 310 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 THUMPD1Q9NXG2 353 aaKnown RBP18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 DOCK4Q8N1I0 1966 aa18.1■□□□□ 0.49
SFSWAP-207ENST00000538548 A0A075B6Q4 140 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 MEIOCA2RUB1 952 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 SLC28A1O00337 649 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 CTDSP2O14595 271 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 ENDOUP21128 410 aaKnown RBP18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 ADCYAP1R1P41586 468 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 RPS5P46782 204 aaKnown RBP18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 RFX2P48378 723 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 PRIM2P49643 509 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 VLDLRP98155 873 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 C18orf21Q32NC0 220 aaPredicted RBP18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 INO80DQ53TQ3 878 aaPredicted RBP18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 ARMC4Q5T2S8 1044 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 CEP295NLQ96MC4 621 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 RIPOR3Q96MK2 946 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 A0A0G2JLL6 359 aaPredicted RBP18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 ERVH48-1M5A8F1 160 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 PGFP49763 221 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 IL10RBQ08334 325 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 TTLL9Q3SXZ7 439 aa18.09■□□□□ 0.49
SFSWAP-207ENST00000538548 TOR1AIP1Q5JTV8 583 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms