RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 GZMMP51124 257 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 AP1S2P56377 157 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 DDX39BQ13838 428 aaKnown RBP24.19■■□□□ 1.46
RAB40C-204ENST00000538492 ELMSAN1Q6PJG2 1045 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 KCTD8Q6ZWB6 473 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 CALHM3Q86XJ0 350 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 LILRA3Q8N6C8 439 aaPredicted RBP24.19■■□□□ 1.46
RAB40C-204ENST00000538492 MTERF1Q99551 399 aaKnown RBP24.19■■□□□ 1.46
RAB40C-204ENST00000538492 OSBPL6Q9BZF3 934 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 ING2Q9H160 280 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 U3KQV3 271 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 C5orf42Q9H799 3197 aa24.19■■□□□ 1.46
RAB40C-204ENST00000538492 CARNS1A5YM72 827 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 WASH3PC4AMC7 463 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 RFXANKO14593 260 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 CTSLP07711 333 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 POLR2EP19388 210 aaKnown RBP24.18■■□□□ 1.46
RAB40C-204ENST00000538492 CD22P20273 847 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 EEF1B2P24534 225 aaKnown RBP24.18■■□□□ 1.46
RAB40C-204ENST00000538492 IRF8Q02556 426 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 SF1Q15637 639 aaKnown RBP24.18■■□□□ 1.46
RAB40C-204ENST00000538492 NEDD8Q15843 81 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 PLPP6Q8IY26 295 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 CDC26Q8NHZ8 85 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 CDH23Q9H251 3354 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 A0A1W2PQ67 120 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 KPNA5O15131 536 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 SLC16A5O15375 505 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 PRKACGP22612 351 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 MAPK1P28482 360 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 PREPP48147 710 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.18■■□□□ 1.46
RAB40C-204ENST00000538492 DOK6Q6PKX4 331 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 TESCQ96BS2 214 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 MED8Q96G25 268 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 CXorf21Q9HAI6 301 aa24.18■■□□□ 1.46
RAB40C-204ENST00000538492 PER2O15055 1255 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 RETP07949 1114 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 CDK4P11802 303 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 JUPP14923 745 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 PRPH2P23942 346 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 NTHL1P78549 312 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 VAC14Q08AM6 782 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 RAB39AQ14964 217 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 CCSMST1Q4G0I0 132 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 XKR6Q5GH73 641 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 ZNF551Q7Z340 670 aaPredicted RBP24.17■■□□□ 1.46
RAB40C-204ENST00000538492 TMEM179BQ7Z7N9 219 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 OR7A2PQ8NGA2 310 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 FRS2Q8WU20 508 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 C12orf43Q96C57 262 aaKnown RBP24.17■■□□□ 1.46
RAB40C-204ENST00000538492 TMED5Q9Y3A6 229 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 ARHGEF33A8MVX0 844 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 TSPAN6O43657 245 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 SH3BGRLO75368 114 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 TIMP2P16035 220 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 HOXB9P17482 250 aaPredicted RBP24.17■■□□□ 1.46
RAB40C-204ENST00000538492 PFKLP17858 780 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 CTSCP53634 463 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 CES5AQ6NT32 575 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 DNAJB8Q8NHS0 232 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 CRISPLD2Q9H0B8 497 aa24.17■■□□□ 1.46
RAB40C-204ENST00000538492 E7EQ34 232 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 RHOP08100 348 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 MAP4P27816 1152 aaKnown RBP24.16■■□□□ 1.46
RAB40C-204ENST00000538492 KIR3DL1P43629 444 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 SYT12Q8IV01 421 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 OSBPL10Q9BXB5 764 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 REXO4Q9GZR2 422 aaKnown RBP24.16■■□□□ 1.46
RAB40C-204ENST00000538492 AP3M1Q9Y2T2 418 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 E2F6O75461 281 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 FTH1P02794 183 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 POLR2IP36954 125 aaKnown RBP24.16■■□□□ 1.46
RAB40C-204ENST00000538492 PIGAP37287 484 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 SYTL3Q4VX76 610 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 HENMT1Q5T8I9 393 aaKnown RBP24.16■■□□□ 1.46
RAB40C-204ENST00000538492 THOC6Q86W42 341 aaKnown RBP24.16■■□□□ 1.46
RAB40C-204ENST00000538492 HOMEZQ8IX15 550 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 RAVER1Q8IY67 606 aaKnown RBP24.16■■□□□ 1.46
RAB40C-204ENST00000538492 FAM9CQ8IZT9 166 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 OR52E4Q8NGH9 312 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 MRGPRX3Q96LB0 322 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 ZSWIM3Q96MP5 696 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 DCUN1D5Q9BTE7 237 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 ADNPQ9H2P0 1102 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 PRM3Q9NNZ6 103 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 FAM118AQ9NWS6 357 aa24.16■■□□□ 1.46
RAB40C-204ENST00000538492 SLCO2B1O94956 709 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 XPAP23025 273 aaPredicted RBP24.15■■□□□ 1.46
RAB40C-204ENST00000538492 HLCSP50747 726 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 PPP2R2BQ00005 443 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 SPIDRQ14159 915 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 GPR107Q5VW38 600 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 FBXL8Q96CD0 374 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 MBOAT4Q96T53 435 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 AMBRA1Q9C0C7 1298 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 TIMMDC1Q9NPL8 285 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 THG1LQ9NWX6 298 aaKnown RBP24.15■■□□□ 1.46
RAB40C-204ENST00000538492 PLXNA2O75051 1894 aa24.15■■□□□ 1.46
RAB40C-204ENST00000538492 EFCAB14O75071 495 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms