RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 MARCH4Q9P2E8 410 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 PLEKHB1Q9UF11 243 aaPredicted RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 FBXL4Q9UKA2 621 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 DRG1Q9Y295 367 aaKnown RBP8.29□□□□□ -1.08
DDB1-212ENST00000538470 VPS9D1Q9Y2B5 631 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 CPAMD8Q8IZJ3 1885 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 TEX15Q9BXT5 2789 aa8.29□□□□□ -1.08
DDB1-212ENST00000538470 SVILO95425 2214 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 DIDO1Q9BTC0 2240 aaKnown RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 OR2A25A4D2G3 310 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 PRPF4O43172 522 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDB1-212ENST00000538470 VPS26AO75436 327 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 C1orf105O95561 183 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 ESR1P03372 595 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 ERGP11308 486 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 ETS1P14921 441 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 PAMP19021 973 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 ALAS2P22557 587 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 ITGA3P26006 1051 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 ARNTP27540 789 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 GRIA3P42263 894 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 BDKRB1P46663 353 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 CARSP49589 748 aaKnown RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 EIF3BP55884 814 aaKnown RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 RBBP7Q16576 425 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 NKG7Q16617 165 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 FAM214AQ32MH5 1076 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 TUBB8Q3ZCM7 444 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 CTSL3PQ5NE16 218 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 PRAMEF13Q5VWM6 474 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 KIAA0930Q6ICG6 404 aaPredicted RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 LRRC8BQ6P9F7 803 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 Q6ZS92 163 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 GSTA5Q7RTV2 222 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 SDCCAG8Q86SQ7 713 aaPredicted RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 PRUNE1Q86TP1 453 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 LDB1Q86U70 411 aaPredicted RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 FAM20CQ8IXL6 584 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 OTUD6BQ8N6M0 293 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 TRIM58Q8NG06 486 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 OR2L3Q8NG85 312 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 SKA2Q8WVK7 121 aaPredicted RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 LPGAT1Q92604 370 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 ANP32BQ92688 251 aaKnown RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 SNRNP40Q96DI7 357 aaKnown RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 TCF12Q99081 682 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 WDR77Q9BQA1 342 aaPredicted RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 SLC6A20Q9NP91 592 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 FAM114A2Q9NRY5 505 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 LUZP4Q9P127 313 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 CDC23Q9UJX2 597 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 TTC7AQ9ULT0 858 aaPredicted RBP8.28□□□□□ -1.08
DDB1-212ENST00000538470 SOX13Q9UN79 622 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 KLHL20Q9Y2M5 609 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 PCDHGA10Q9Y5H3 936 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 HS3ST3B1Q9Y662 390 aa8.28□□□□□ -1.08
DDB1-212ENST00000538470 ZGRF1Q86YA3 2104 aa8.27□□□□□ -1.08
DDB1-212ENST00000538470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 A0A1W2PPV9 198 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 ZNF839A8K0R7 811 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 MYO1CO00159 1063 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 SOCS6O14544 535 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 PCDH17O14917 1159 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 NRDCO43847 1150 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 CTSVO60911 334 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 SEMA7AO75326 666 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 CCNDBP1O95273 360 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 FGGP02679 453 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 CCDC175P0C221 793 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 ZSCAN5DPP0CG00 497 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 ERVK-10P10266 1014 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 MCM3P25205 808 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 MGAT1P26572 445 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 PSMB5P28074 263 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 NMBRP28336 390 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 CMPK1P30085 196 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 HSD17B2P37059 387 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 MAGEA6P43360 314 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 EMP3P54852 163 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 VSX2P58304 361 aaPredicted RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 CRADDP78560 199 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 SARNPP82979 210 aaKnown RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 MRPL49Q13405 166 aaKnown RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 ELOAQ14241 798 aaKnown RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 ARHGAP19Q14CB8 494 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 MUM1Q2TAK8 710 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 PLEKHN1Q494U1 663 aaPredicted RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 AGAP7PQ5VUJ5 663 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 B3GNTL1Q67FW5 361 aaPredicted RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 CNSTQ6PJW8 725 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 IGFL2Q6UWQ7 119 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 LRRC8AQ8IWT6 810 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 OR2A1Q8NGT9 310 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 INPP5DQ92835 1189 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 MVB12AQ96EY5 273 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 BIRC8Q96P09 236 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 AGAP4Q96P64 663 aa8.27□□□□□ -1.09
DDB1-212ENST00000538470 BARD1Q99728 777 aaKnown RBP8.27□□□□□ -1.09
DDB1-212ENST00000538470 MIPEPQ99797 713 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms