RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 FAM8A1Q9UBU6 413 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 SLC27A6Q9Y2P4 619 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 TRIM64A6NGJ6 449 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 PSMD11O00231 422 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 PER2O15055 1255 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 NPC1O15118 1278 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ATG13O75143 517 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 B3GALT4O96024 378 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 POU2F2P09086 479 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ZNF23P17027 643 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 MAPK1P28482 360 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 PREPP48147 710 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 NRIP1P48552 1158 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 METAP1P53582 386 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ROR2Q01974 943 aaKnown RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ZNF33BQ06732 778 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 PCDH1Q08174 1060 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 CCSMST1Q4G0I0 132 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 NOXRED1Q6NXP6 359 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ENPP6Q6UWR7 440 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 THOC6Q86W42 341 aaKnown RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ETFBKMTQ8IXQ9 262 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 PHACTR4Q8IZ21 702 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 NRSN1Q8IZ57 195 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 ZFP28Q8NHY6 868 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 TMEM159Q96B96 161 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 COQ10AQ96MF6 247 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 OR4K3Q96R72 315 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 CCM2Q9BSQ5 444 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 INPP5KQ9BT40 448 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 OSBPL6Q9BZF3 934 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 CLK4Q9HAZ1 481 aaKnown RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 HPS4Q9NQG7 708 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 STOX2Q9P2F5 926 aaPredicted RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 GULP1Q9UBP9 304 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 INVSQ9Y283 1065 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 MRPS23Q9Y3D9 190 aaKnown RBP13.61□□□□□ -0.23
LIMK1-208ENST00000538333 KIAA1549LQ6ZVL6 1849 aa13.61□□□□□ -0.23
LIMK1-208ENST00000538333 TRIM64CA6NLI5 447 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 FAM220BPB1ANY3 271 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 CXCR6O00574 342 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 WNT9AO14904 365 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 DEAF1O75398 565 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-208ENST00000538333 GMNNO75496 209 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 SOD1P00441 154 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 MAP4P27816 1152 aaKnown RBP13.6□□□□□ -0.23
LIMK1-208ENST00000538333 ALDH3B2P48448 385 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 HNRNPFP52597 415 aaKnown RBP13.6□□□□□ -0.23
LIMK1-208ENST00000538333 IRF8Q02556 426 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 CHRNB3Q05901 458 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 CSTF3Q12996 717 aaKnown RBP13.6□□□□□ -0.23
LIMK1-208ENST00000538333 ACOX1Q15067 660 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 KCTD21Q4G0X4 260 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 SYTL3Q4VX76 610 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 ERAP2Q6P179 960 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 AGTRAPQ6RW13 159 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 NLRP8Q86W28 1048 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 MICU2Q8IYU8 434 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 SLC22A15Q8IZD6 547 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 VN1R2Q8NFZ6 395 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 MAGEE2Q8TD90 523 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-208ENST00000538333 CSGALNACT1Q8TDX6 532 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 HERVK_113Q902F9 699 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 NXPE3Q969Y0 559 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 DTD2Q96FN9 168 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 AURKBQ96GD4 344 aaPredicted RBP13.6□□□□□ -0.23
LIMK1-208ENST00000538333 FBXL20Q96IG2 436 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 ITCHQ96J02 903 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 CCDC138Q96M89 665 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 HAUS8Q9BT25 410 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 TBCDQ9BTW9 1192 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 ADGRE2Q9UHX3 823 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 RWDD3Q9Y3V2 267 aa13.6□□□□□ -0.23
LIMK1-208ENST00000538333 PRRT4C9JH25 899 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 E7EQ34 232 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 H0Y858 1186 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 KPNA3O00505 521 aaPredicted RBP13.59□□□□□ -0.23
LIMK1-208ENST00000538333 SCELO95171 688 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 CAPGP40121 348 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 CDKN2CP42773 168 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 TUBA4AP68366 448 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 MTAPQ13126 283 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 TMEM214Q6NUQ4 689 aaKnown RBP13.59□□□□□ -0.23
LIMK1-208ENST00000538333 PSRC1Q6PGN9 363 aaPredicted RBP13.59□□□□□ -0.23
LIMK1-208ENST00000538333 GCNT7Q6ZNI0 430 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 MSANTD1Q6ZTZ1 278 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 USP51Q70EK9 711 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 GPR149Q86SP6 731 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 ANKRD46Q86W74 232 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 KIAA1958Q8N8K9 716 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 ATL1Q8WXF7 558 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 C11orf24Q96F05 449 aaPredicted RBP13.59□□□□□ -0.23
LIMK1-208ENST00000538333 WRAP53Q9BUR4 548 aaKnown RBP13.59□□□□□ -0.23
LIMK1-208ENST00000538333 UGT2B28Q9BY64 529 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 TRIM4Q9C037 500 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 RMND5AQ9H871 391 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 SPATA6Q9NWH7 488 aaPredicted RBP13.59□□□□□ -0.23
LIMK1-208ENST00000538333 GPRC5BQ9NZH0 403 aa13.59□□□□□ -0.23
LIMK1-208ENST00000538333 DMTF1Q9Y222 760 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms