RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CMTM4Q8IZR5 234 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 TTC30BQ8N4P2 665 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 TRAM1L1Q8N609 369 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 PPM1NQ8N819 430 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 GPATCH11Q8N954 259 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 GPR26Q8NDV2 337 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 OR13C4Q8NGS5 318 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 GDAP1Q8TB36 358 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 MAGEC3Q8TD91 643 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 TSPEARQ8WU66 669 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 STYXQ8WUJ0 223 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 SCAMP4Q969E2 229 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 CENPTQ96BT3 561 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 ULK4Q96C45 1275 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 LRRC39Q96DD0 335 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 CFAP36Q96G28 342 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 DCUN1D1Q96GG9 259 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 HIC2Q96JB3 615 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 DNAJC1Q96KC8 554 aaKnown RBP4.24□□□□□ -1.73
SNHG1-208ENST00000538266 TTC25Q96NG3 672 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 OR14A2Q96R54 314 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 RANBP9Q96S59 729 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 FMO2Q99518 471 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 KLF6Q99612 283 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-208ENST00000538266 C19orf43Q9BQ61 176 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 RIOK2Q9BVS4 552 aaKnown RBP4.24□□□□□ -1.73
SNHG1-208ENST00000538266 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 SLC13A1Q9BZW2 595 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 ARRDC1-AS1Q9H2J1 176 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 CENPHQ9H3R5 247 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 CXorf56Q9H5V9 222 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 MRM3Q9HC36 420 aaKnown RBP4.24□□□□□ -1.73
SNHG1-208ENST00000538266 SLC40A1Q9NP59 571 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 IL26Q9NPH9 171 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 PPANQ9NQ55 473 aaKnown RBP4.24□□□□□ -1.73
SNHG1-208ENST00000538266 NLE1Q9NVX2 485 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-208ENST00000538266 SYBUQ9NX95 663 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 PLA2G3Q9NZ20 509 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 GRHL1Q9NZI5 618 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 IL17CQ9P0M4 197 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 NFKBIL1Q9UBC1 381 aaPredicted RBP4.24□□□□□ -1.73
SNHG1-208ENST00000538266 KLQ9UEF7 1012 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 CRLS1Q9UJA2 301 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 MOSPD1Q9UJG1 213 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 RIMKLBQ9ULI2 386 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 CHMP2BQ9UQN3 213 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 CA5BQ9Y2D0 317 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 SPEF1Q9Y4P9 236 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 OR1A2Q9Y585 309 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 GPR45Q9Y5Y3 372 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 HS3ST3A1Q9Y663 406 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 SLC30A1Q9Y6M5 507 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 RPS6KL1Q9Y6S9 549 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 PLXNA2O75051 1894 aa4.24□□□□□ -1.73
SNHG1-208ENST00000538266 MYLKQ15746 1914 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 LRRK1Q38SD2 2015 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 FAM237BA0A1B0GVD1 139 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 A0A1B0GVT2 93 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 CCDC162PA2VCL2 907 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 POM121BA6NF01 834 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 F8W8V4 182 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 TLR4O00206 839 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 CCL22O00626 93 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 RAD51BO15315 384 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 YKT6O15498 198 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 DFNA5O60443 496 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 PRAMEF4O60810 478 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 LRP3O75074 770 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 RASSF9O75901 435 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 USP1O94782 785 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 VAPBO95292 243 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 GSTA1P08263 222 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 LTA4HP09960 611 aaKnown RBP4.23□□□□□ -1.73
SNHG1-208ENST00000538266 ZNF806P0C7X5 589 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 EZRP15311 586 aaKnown RBP4.23□□□□□ -1.73
SNHG1-208ENST00000538266 MSH3P20585 1137 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 AGXTP21549 392 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 CTSSP25774 331 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 NMBRP28336 390 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 TEAD1P28347 426 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 ADSLP30566 484 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-208ENST00000538266 ELK3P41970 407 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 MAGEA3P43357 314 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 TTPAP49638 278 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 BLKP51451 505 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 KIAA1024LP59773 190 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 PFN3P60673 137 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 ADAM8P78325 824 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 NHLH1Q02575 133 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 PPARDQ03181 441 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 CACNG1Q06432 222 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 IFT88Q13099 833 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 THOC5Q13769 683 aaKnown RBP4.23□□□□□ -1.73
SNHG1-208ENST00000538266 PTPRCAPQ14761 206 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 ICAM4Q14773 271 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 CRYMQ14894 314 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 NFATC4Q14934 902 aa4.23□□□□□ -1.73
SNHG1-208ENST00000538266 PCBP2Q15366 365 aaKnown RBP eCLIP4.23□□□□□ -1.73
SNHG1-208ENST00000538266 CHRNA6Q15825 494 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms