RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 WRAP53Q9BUR4 548 aaKnown RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SLC6A16Q9GZN6 736 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 TMEM245Q9H330 911 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SOX17Q9H6I2 414 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ZIM2Q9NZV7 527 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ABCD2Q9UBJ2 740 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ACAD8Q9UKU7 415 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 PIKFYVEQ9Y2I7 2098 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 CROCCQ5TZA2 2017 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 MUC22E2RYF6 1773 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 C2orf16Q68DN1 1984 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 OR2AG2A6NM03 316 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 NME4O00746 187 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 FFAR3O14843 346 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ANKRD28O15084 1053 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ANGPT2O15123 496 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SLC16A5O15375 505 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 GPR42O15529 346 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SLCO2B1O94956 709 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 BMP10O95393 424 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 PRNPP04156 253 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 G6PDP11413 515 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 EPB42P16452 691 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 NFKBIAP25963 317 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 HMOX2P30519 316 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 OPRD1P41143 372 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 TUBA4AP68366 448 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 CAPRIN1Q14444 709 aaKnown RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ZNF234Q14588 700 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ACOX1Q15067 660 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 AAK1Q2M2I8 961 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ZNF284Q2VY69 593 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SAMD4BQ5PRF9 694 aaKnown RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 TTC33Q6PID6 262 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 VITQ6UXI7 678 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 GPR141Q7Z602 305 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 GPR149Q86SP6 731 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ZNF554Q86TJ5 538 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SLC15A3Q8IY34 581 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 NRSN1Q8IZ57 195 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 OFCC1Q8IZS5 231 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 ANKFN1Q8N957 763 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 LZICQ8WZA0 190 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 AP2M1Q96CW1 435 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 LRRC58Q96CX6 371 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 CHFRQ96EP1 664 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 FBXL20Q96IG2 436 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 HOPXQ9BPY8 73 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 PBX4Q9BYU1 374 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 OSBPL6Q9BZF3 934 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 PLA2G2FQ9BZM2 168 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 NAA50Q9GZZ1 169 aaKnown RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 SLC32A1Q9H598 525 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 CMTM6Q9NX76 183 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 OBP2AQ9NY56 170 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 GDE1Q9NZC3 331 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 RABL2AQ9UBK7 228 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-210ENST00000538120 COQ6Q9Y2Z9 468 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 TRANK1O15050 2925 aa10.45□□□□□ -0.74
CLIP1-210ENST00000538120 COL4A3Q01955 1670 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 EDDM13A0A1B0GTR0 161 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 PSMD11O00231 422 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 MANBAO00462 879 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 WNT9AO14904 365 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 AREL1O15033 823 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 PRAMEF4O60810 478 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 RSL1D1O76021 490 aaKnown RBP10.44□□□□□ -0.74
CLIP1-210ENST00000538120 WDR47O94967 919 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 BMP2P12643 396 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 CD247P20963 164 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 SLC6A2P23975 617 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 ITGB7P26010 798 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 OXTRP30559 389 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 POLR2JP52435 117 aaKnown RBP10.44□□□□□ -0.74
CLIP1-210ENST00000538120 NR6A1Q15406 480 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 AP5B1Q2VPB7 878 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 PRAMEF9Q5VWM5 478 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 NEK5Q6P3R8 708 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 TTC23LQ6PF05 361 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 DHRS4L2Q6PKH6 230 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 NEK10Q6ZWH5 1172 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 CHST15Q7LFX5 561 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-210ENST00000538120 ERMP1Q7Z2K6 904 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 TRIM46Q7Z4K8 759 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 LILRA3Q8N6C8 439 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-210ENST00000538120 OR2T34Q8NGX1 318 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 OR2T3Q8NH03 318 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 HM13Q8TCT9 377 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 MIPOL1Q8TD10 442 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 USP7Q93009 1102 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 DTD2Q96FN9 168 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 DUS3LQ96G46 650 aaKnown RBP10.44□□□□□ -0.74
CLIP1-210ENST00000538120 NKX2-4Q9H2Z4 354 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 IGFLR1Q9H665 355 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 MRPL40Q9NQ50 206 aaKnown RBP10.44□□□□□ -0.74
CLIP1-210ENST00000538120 ZMIZ1Q9ULJ6 1067 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 KCNE1BA0A087WTH5 132 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 FAM234BA2RU67 622 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 KPNA5O15131 536 aa10.44□□□□□ -0.74
CLIP1-210ENST00000538120 TSPAN6O43657 245 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms