RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ACADLP28330 430 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 EEF1DP29692 281 aaKnown RBP10.6□□□□□ -0.71
CLPB-208ENST00000538021 MC4RP32245 332 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 ST13P50502 369 aaKnown RBP10.6□□□□□ -0.71
CLPB-208ENST00000538021 AP2B1P63010 937 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 MYBPHQ13203 477 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 SF1Q15637 639 aaKnown RBP10.6□□□□□ -0.71
CLPB-208ENST00000538021 CEBPEQ15744 281 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 SYTL3Q4VX76 610 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 ODF2Q5BJF6 829 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 PRMT9Q6P2P2 845 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 FIGLAQ6QHK4 219 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 CEP128Q6ZU80 1094 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 MICALCLQ6ZW33 695 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 TAS2R42Q7RTR8 314 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 SERPINA9Q86WD7 417 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 ZNF567Q8N184 647 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 RNF25Q96BH1 459 aaPredicted RBP10.6□□□□□ -0.71
CLPB-208ENST00000538021 SLC22A18Q96BI1 424 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 DMRTA2Q96SC8 542 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 APOL2Q9BQE5 337 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 FICDQ9BVA6 458 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 LUC7LQ9NQ29 371 aaKnown RBP10.6□□□□□ -0.71
CLPB-208ENST00000538021 NPDC1Q9NQX5 325 aaPredicted RBP10.6□□□□□ -0.71
CLPB-208ENST00000538021 ANKRD10Q9NXR5 420 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 RSPH14Q9UHP6 348 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 GTF3C1Q12789 2109 aa10.6□□□□□ -0.71
CLPB-208ENST00000538021 INTS1Q8N201 2190 aaKnown RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 RCCD1A6NED2 376 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 C3orf70A6NLC5 250 aaPredicted RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 ADAM10O14672 748 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 RASGRF2O14827 1237 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 SRPX2O60687 465 aaPredicted RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 CRTAMO95727 393 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 KRT1P04264 644 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 GSTM1P09488 218 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 PRSS56P0CW18 603 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 ICAM2P13598 275 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 ACRV1P26436 265 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 PKLRP30613 574 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 ARHGAP25P42331 645 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 GSTM4Q03013 218 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 DSG2Q14126 1118 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 PCOLCEQ15113 449 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 FCRLBQ6BAA4 426 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 BZW1Q7L1Q6 419 aaKnown RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 DMRTC2Q8IXT2 367 aaPredicted RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 BEST3Q8N1M1 668 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 GHDCQ8N2G8 530 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 LINC01555Q8NAE3 123 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 NANOS1Q8WY41 292 aaKnown RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 NINJ1Q92982 152 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 ZNF285Q96NJ3 590 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 SIGLEC12Q96PQ1 595 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 UCK2Q9BZX2 261 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 HSD3B7Q9H2F3 369 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 DNAJB12Q9NXW2 375 aaKnown RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 CHMP5Q9NZZ3 219 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 TRPC4Q9UBN4 977 aa10.59□□□□□ -0.71
CLPB-208ENST00000538021 RPH3AQ9Y2J0 694 aaPredicted RBP10.59□□□□□ -0.71
CLPB-208ENST00000538021 IGLV3-16A0A075B6K0 115 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 IGLV3-12A0A075B6K2 115 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 A0A087X0T9 212 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 A0A0J9YVX5 310 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 A0A1W2PQ72 361 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 ZNF487B1APH4 448 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 CTSVO60911 334 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 S1PR4O95977 384 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 FAM228BP0C875 321 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 FOSL1P15407 271 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 CD46P15529 392 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 CSE1LP55060 971 aaKnown RBP10.58□□□□□ -0.72
CLPB-208ENST00000538021 TUBA3CQ13748 450 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 MESDQ14696 234 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 OR1C1Q15619 314 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 MUM1Q2TAK8 710 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 SKOR2Q2VWA4 1001 aaPredicted RBP10.58□□□□□ -0.72
CLPB-208ENST00000538021 GPR33Q49SQ1 333 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 FRMPD2BQ6IN97 320 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 ALKBH5Q6P6C2 394 aaKnown RBP10.58□□□□□ -0.72
CLPB-208ENST00000538021 TUBA3EQ6PEY2 450 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.58□□□□□ -0.72
CLPB-208ENST00000538021 FAM98AQ8NCA5 519 aaKnown RBP10.58□□□□□ -0.72
CLPB-208ENST00000538021 FRMD6Q96NE9 622 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 IL17FQ96PD4 163 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 MDFIQ99750 246 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 TRIM51Q9BSJ1 452 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 ZNF700Q9H0M5 742 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 KCNJ16Q9NPI9 418 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 DLL4Q9NR61 685 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 SMARCAL1Q9NZC9 954 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 UVRAGQ9P2Y5 699 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 KCNN3Q9UGI6 736 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 BZW2Q9Y6E2 419 aaKnown RBP10.58□□□□□ -0.72
CLPB-208ENST00000538021 PRSS21Q9Y6M0 314 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 FAM169AQ9Y6X4 670 aa10.58□□□□□ -0.72
CLPB-208ENST00000538021 HCFC1P51610 2035 aa10.57□□□□□ -0.72
CLPB-208ENST00000538021 LOC102723996A0A087X1L8 192 aa10.57□□□□□ -0.72
CLPB-208ENST00000538021 LOC105369274A0A096LPK9 316 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms