RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 ERVK-6Q9BXR3 956 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 RIBC2Q9H4K1 309 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 MID1IP1Q9NPA3 183 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 RGS18Q9NS28 235 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 LIMD1Q9UGP4 676 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 SLC23A1Q9UHI7 598 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 MUTYHQ9UIF7 546 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 UTS2RQ9UKP6 389 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 BTRCQ9Y297 605 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 TIMM13Q9Y5L4 95 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 PCP4L1A6NKN8 68 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 B4DXG7 233 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 TSPAN4O14817 238 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 B4GALT3O60512 393 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 F9P00740 461 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 SLC1A2P43004 574 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 FOXA1P55317 472 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 UFM1P61960 85 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 CSNK2BP67870 215 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 NFKB2Q00653 900 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 IKZF1Q13422 519 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 ASAH1Q13510 395 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 TBCEQ15813 527 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 TCTN1Q2MV58 587 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 CDH24Q86UP0 819 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 TSPYL5Q86VY4 417 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 ZDHHC17Q8IUH5 632 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 ZNF557Q8N988 423 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 TTLQ8NG68 377 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 UBASH3BQ8TF42 649 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 ASB15Q8WXK1 588 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 REPS1Q96D71 796 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 ZNF578Q96N58 590 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 RNF121Q9H920 327 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 DYRK4Q9NR20 520 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 TMEM39AQ9NV64 488 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 ADGRE2Q9UHX3 823 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 ATP6V1HQ9UI12 483 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 FZD10Q9ULW2 581 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 HSPB11Q9Y547 144 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 PCDHB5Q9Y5E4 795 aa11.08□□□□□ -0.64
SEMA4D-221ENST00000537934 A0A0B4J293 547 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SLC12A8A0AV02 714 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SEC22BO75396 215 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SLC22A5O76082 557 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 PRR35P0CG20 571 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 CHMP24386 653 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 CCL23P55773 120 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 GALEQ14376 348 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 BAK1Q16611 211 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 UPP1Q16831 310 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 PROX2Q3B8N5 592 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 TRIM60Q495X7 471 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 PCID2Q5JVF3 399 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 CLVS2Q5SYC1 327 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 WSCD1Q658N2 575 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 NAPEPLDQ6IQ20 393 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 DLEU7Q6UYE1 221 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SLC24A5Q71RS6 500 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 CYP4Z1Q86W10 505 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 KIF18BQ86Y91 864 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 LINC00469Q8N7U9 141 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 RNF31Q96EP0 1072 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 ZNF583Q96ND8 569 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 MCCC1Q96RQ3 725 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 BRINP2Q9C0B6 783 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 OR51E2Q9H255 320 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SCPEP1Q9HB40 452 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 NDRG4Q9ULP0 352 aaKnown RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 FAM234BA2RU67 622 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 GSTA4O15217 222 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 RECQL5O94762 991 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 IFNA16P05015 189 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 CYP4B1P13584 511 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 ZNF250P15622 560 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 TNNI3P19429 210 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 MTPNP58546 118 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SCN1BQ07699 218 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 BAMBIQ13145 260 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 ZNF267Q14586 743 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 GOLGA7BQ2TAP0 167 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 FBXO43Q4G163 708 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SETMARQ53H47 684 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SOWAHCQ53LP3 525 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 CLLU1OSQ5K130 101 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 GARNL3Q5VVW2 1013 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 SHQ1Q6PI26 577 aaKnown RBP11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 ARSKQ6UWY0 536 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 PRSS42Q7Z5A4 293 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 TRIM48Q8IWZ4 208 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 TP53INP2Q8IXH6 220 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 CYP4Z2PQ8N1L4 340 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 OR52E4Q8NGH9 312 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 RNF139Q8WU17 664 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 GIMAP5Q96F15 307 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 KCNS3Q9BQ31 491 aa11.07□□□□□ -0.64
SEMA4D-221ENST00000537934 GABARAPL1Q9H0R8 117 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms