RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ST6GALNAC4Q9H4F1 302 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CYB5R1Q9UHQ9 305 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 A0A1W2PQ09 198 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ORC5O43913 435 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 DLX3O60479 287 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 RNGTTO60942 597 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CTGFP29279 349 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 RFX2P48378 723 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 LAPTM5Q13571 262 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 VARS2Q5ST30 1063 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 LCN1P1Q5VSP4 162 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ANKRD54Q6NXT1 300 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ERICH5Q6P6B1 374 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 TXNDC11Q6PKC3 985 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 RASSF6Q6ZTQ3 369 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 AHSA2Q719I0 299 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ANKRD33Q7Z3H0 272 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 CUZD1Q86UP6 607 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 LRRC17Q8N6Y2 441 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 PDXPQ96GD0 296 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 HPDLQ96IR7 371 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 ARL5BQ96KC2 179 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 AMBRA1Q9C0C7 1298 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 NKX2-4Q9H2Z4 354 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 MFSD1Q9H3U5 465 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 RANBP3Q9H6Z4 567 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 USP22Q9UPT9 525 aa10.63□□□□□ -0.71
CLSTN3-207ENST00000537408 PCM1Q15154 2024 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 TRAV6A0A075B6T7 132 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 TRAV20A0A0B4J274 112 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 F5H423 210 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 ACKR2O00590 384 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 MT-CO1P00395 513 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 LCKP06239 509 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 ADH1AP07327 375 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 DARSP14868 501 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 ZNF3P17036 446 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 C4BPBP20851 252 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 HTR1EP28566 365 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 HSD17B2P37059 387 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 PIGAP37287 484 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 LIPIQ6XZB0 460 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 ARHGAP36Q6ZRI8 547 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 SERINC5Q86VE9 423 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 HIPK1Q86Z02 1210 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 FAM126BQ8IXS8 530 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 TNKS2Q9H2K2 1166 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 C3orf14Q9HBI5 128 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 MLXQ9UH92 298 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 UBQLN1Q9UMX0 589 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 B4DXG7 233 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 DNTTP04053 509 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 HSMCR30P0CW71 290 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 TGFBR2P37173 567 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 CES3Q6UWW8 571 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 FAM131AQ6UXB0 335 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 RBM23Q86U06 439 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 SCUBE3Q8IX30 993 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 DAW1Q8N136 415 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 SRFBP1Q8NEF9 429 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 TMEM161AQ9NX61 479 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 CSF2P04141 144 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 CXCL8P10145 99 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 KCNA5P22460 613 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 TNFSF8P32971 234 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 CAPZA2P47755 286 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 ABATP80404 500 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 METTL11BQ5VVY1 283 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 TRIQKQ629K1 86 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 PAMR1Q6UXH9 720 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 ZPBP2Q6X784 338 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 DCP1BQ8IZD4 617 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 FSTL5Q8N475 847 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 TMEM161BQ8NDZ6 487 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 OR52H1Q8NGJ2 320 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 JOSD2Q8TAC2 188 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 CGRRF1Q99675 332 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 EDARQ9UNE0 448 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 MAB21L2Q9Y586 359 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 LTBP1Q14766 1721 aa10.62□□□□□ -0.71
CLSTN3-207ENST00000537408 KRBOX1C9JBD0 128 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 STAU1O95793 577 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 PRKAR1AP10644 381 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 ITGAMP11215 1152 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 MASP1P48740 699 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 SCNN1GP51170 649 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 GPR68Q15743 365 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 TATDN3Q17R31 274 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 EIF3MQ7L2H7 374 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 TMEM125Q96AQ2 219 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 OLA1Q9NTK5 396 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 HES2Q9Y543 173 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 PCDHB5Q9Y5E4 795 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 MAGED1Q9Y5V3 778 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 COL4A1P02462 1669 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 TRIOBPQ9H2D6 2365 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 A0A075B6Q4 140 aa10.61□□□□□ -0.71
CLSTN3-207ENST00000537408 H7C2Y5 167 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms